ClampFISH detects individual nucleic acid molecules using click chemistry–based amplification

Visualizing adenosine-to-inosine RNA editing in single mammalian cells

(2017) Ian A Mellis et al.   NATURE METHODS

Single-molecule RNA detection at depth by hybridization chain reaction and tissue hydrogel embedding and clearing

(2016) Sheel Shah et al.   DEVELOPMENT

Loss of endothelial barrier integrity in mice with conditional ablation of podocalyxin (Podxl) in endothelial cells

(2016) Angélica Horrillo et al.   EUROPEAN JOURNAL OF CELL BIOLOGY

Nanoscale imaging of RNA with expansion microscopy

(2016) Fei Chen et al.   NATURE METHODS

Sensitive and specific miRNA detection method using SplintR Ligase

(2016) Jingmin Jin et al.   NUCLEIC ACIDS RESEARCH

Single Mammalian Cells Compensate for Differences in Cellular Volume and DNA Copy Number through Independent Global Transcriptional Mechanisms

(2015) Olivia Padovan-Merhar et al.   MOLECULAR CELL

Expansion microscopy

(2015) F. Chen et al.   SCIENCE

Next-Generation in Situ Hybridization Chain Reaction: Higher Gain, Lower Cost, Greater Durability

(2014) Harry M. T. Choi et al.   ACS Nano

Rolling circle amplification: a versatile tool for chemical biology, materials science and medicine

(2014) M. Monsur Ali et al.   CHEMICAL SOCIETY REVIEWS

Profiling T Cell Activation Using Single-Molecule Fluorescence In Situ Hybridization and Flow Cytometry

(2014) Yuri Bushkin et al.   JOURNAL OF IMMUNOLOGY

Transcriptional profiling of cells sorted by RNA abundance

(2014) Sandy Klemm et al.   NATURE METHODS

Image-based transcriptomics in thousands of single human cells at single-molecule resolution

(2013) Nico Battich et al.   NATURE METHODS

Efficient DNA ligation in DNA–RNA hybrid helices by Chlorella virus DNA ligase

(2013) Gregory J. S. Lohman et al.   NUCLEIC ACIDS RESEARCH

Specific Sorting of Single Bacterial Cells with Microfabricated Fluorescence-Activated Cell Sorting and Tyramide Signal Amplification Fluorescence in Situ Hybridization

(2011) Chun H. Chen et al.   ANALYTICAL CHEMISTRY

Increasing the Efficacy of Bioorthogonal Click Reactions for Bioconjugation: A Comparative Study

(2011) Christen Besanceney-Webler et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Validating transcripts with probes and imaging technology

(2011) Shalev Itzkovitz et al.   NATURE METHODS

In situ detection and genotyping of individual mRNA molecules

(2010) Chatarina Larsson et al.   NATURE METHODS

Imaging individual microRNAs in single mammalian cells in situ

(2009) J. Lu et al.   NUCLEIC ACIDS RESEARCH

Novel application of Phi29 DNA polymerase: RNA detection and analysis in vitro and in situ by target RNA-primed RCA

(2009) A. Lagunavicius et al.   RNA

Imaging individual mRNA molecules using multiple singly labeled probes

(2008) Arjun Raj et al.   NATURE METHODS