Transcriptome Analysis of Long Non-Coding RNA in the Bovine Mammary Gland Following Dietary Supplementation with Linseed Oil and Safflower Oil
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Transcriptome Analysis of Long Non-Coding RNA in the Bovine Mammary Gland Following Dietary Supplementation with Linseed Oil and Safflower Oil
Authors
Keywords
-
Journal
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Volume 19, Issue 11, Pages 3610
Publisher
MDPI AG
Online
2018-11-16
DOI
10.3390/ijms19113610
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Emerging role of nutrition and the non-coding landscape in type 2 diabetes mellitus: A review of literature
- (2018) Marwa Matboli et al. GENE
- Treatment and post-treatment effects of dietary supplementation with safflower oil and linseed oil on milk components and blood metabolites of Canadian Holstein cows
- (2018) Adolf A. Ammah et al. JOURNAL OF APPLIED ANIMAL RESEARCH
- Long noncoding RNAs are associated with metabolic and cellular processes in the jejunum mucosa of pre-weaning calves in response to different diets
- (2018) Rosemarie Weikard et al. Oncotarget
- Integration of lncRNA and mRNA Transcriptome Analyses Reveals Genes and Pathways Potentially Involved in Calf Intestinal Growth and Development during the Early Weeks of Life
- (2018) Eveline Ibeagha-Awemu et al. Genes
- Co-Expression Network and Pathway Analyses Reveal Important Modules of miRNAs Regulating Milk Yield and Component Traits
- (2017) Duy Do et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Genome-wide association analysis and pathways enrichment for lactation persistency in Canadian Holstein cattle
- (2017) D.N. Do et al. JOURNAL OF DAIRY SCIENCE
- Analyses of long non-coding RNAs and mRNA profiling through RNA sequencing of MDBK cells at different stages of bovine viral diarrhea virus infection
- (2017) Qiman Ma et al. RESEARCH IN VETERINARY SCIENCE
- lncRNA H19 is involved in TGF-β1-induced epithelial to mesenchymal transition in bovine epithelial cells through PI3K/AKT Signaling Pathway
- (2017) Wei Yang et al. PeerJ
- MicroRNA roles in signalling during lactation: an insight from differential expression, time course and pathway analyses of deep sequence data
- (2017) Duy N. Do et al. Scientific Reports
- Transcriptome adaptation of the bovine mammary gland to diets rich in unsaturated fatty acids shows greater impact of linseed oil over safflower oil on gene expression and metabolic pathways
- (2016) Eveline M. Ibeagha-Awemu et al. BMC GENOMICS
- Integrative Transcriptome Analyses of Metabolic Responses in Mice Define Pivotal LncRNA Metabolic Regulators
- (2016) Ling Yang et al. Cell Metabolism
- Unique features of long non-coding RNA biogenesis and function
- (2016) Jeffrey J. Quinn et al. NATURE REVIEWS GENETICS
- Roles for long non-coding RNAs in physiology and disease
- (2016) Maria-Theodora Melissari et al. PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY
- The long non-coding RNA HOTAIR increases tumour growth and invasion in cervical cancer by targeting the Notch pathway
- (2016) Maria Lee et al. Oncotarget
- Comparative Analysis of the miRNome of Bovine Milk Fat, Whey and Cells
- (2016) Ran Li et al. PLoS One
- Characterization of long non-coding RNA transcriptome in high-energy diet induced nonalcoholic steatohepatitis minipigs
- (2016) Jihan Xia et al. Scientific Reports
- Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
- (2015) Ran Li et al. BMC GENOMICS
- Long Noncoding RNA in Hematopoiesis and Immunity
- (2015) Ansuman T. Satpathy et al. IMMUNITY
- Transcriptome MicroRNA Profiling of Bovine Mammary Glands Infected with Staphylococcus aureus
- (2015) Rui Li et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Characterization of microRNA profile in mammary tissue of dairy and beef breed heifers
- (2015) Z. Wicik et al. JOURNAL OF ANIMAL BREEDING AND GENETICS
- Long Non-Coding RNA Central of Glucose Homeostasis
- (2015) Xiangbo Ruan JOURNAL OF CELLULAR BIOCHEMISTRY
- The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3
- (2015) Colleen A. McHugh et al. NATURE
- Long noncoding RNAs in cardiac development and ageing
- (2015) Nature Reviews Cardiology
- NONCODE 2016: an informative and valuable data source of long non-coding RNAs
- (2015) Yi Zhao et al. NUCLEIC ACIDS RESEARCH
- Exploring the function of long non-coding RNA in the development of bovine early embryos
- (2015) Julieta Caballero et al. REPRODUCTION FERTILITY AND DEVELOPMENT
- Long Noncoding RNAs: A New Regulatory Code in Metabolic Control
- (2015) Xu-Yun Zhao et al. TRENDS IN BIOCHEMICAL SCIENCES
- A catalogue of novel bovine long noncoding RNA across 18 tissues
- (2015) Lambros T. Koufariotis et al. PLoS One
- Identification of large intergenic non-coding RNAs in bovine muscle using next-generation transcriptomic sequencing
- (2014) Coline Billerey et al. BMC GENOMICS
- Transcriptome microRNA profiling of bovine mammary epithelial cells challenged with Escherichia coli or Staphylococcus aureus bacteria reveals pathogen directed microRNA expression profiles
- (2014) Weiwu Jin et al. BMC GENOMICS
- Long Noncoding RNAs in Cell-Fate Programming and Reprogramming
- (2014) Ryan A. Flynn et al. Cell Stem Cell
- Characterisation and Comparison of Lactating Mouse and Bovine Mammary Gland miRNomes
- (2014) Sandrine Le Guillou et al. PLoS One
- Keeping abreast with long non-coding RNAs in mammary gland development and breast cancer
- (2014) Herah Hansji et al. Frontiers in Genetics
- Identification of novel transcripts and noncoding RNAs in bovine skin by deep next generation sequencing
- (2013) Rosemarie Weikard et al. BMC GENOMICS
- Long non-coding RNAHOTAIRis an independent prognostic marker for nasopharyngeal carcinoma progression and survival
- (2013) Yan Nie et al. CANCER SCIENCE
- lincRNAs: Genomics, Evolution, and Mechanisms
- (2013) Igor Ulitsky et al. CELL
- Long noncoding RNAs in innate and adaptive immunity
- (2013) Katherine A. Fitzgerald et al. CURRENT OPINION IN IMMUNOLOGY
- linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis
- (2013) H. Maamar et al. GENES & DEVELOPMENT
- Repression of the Long Noncoding RNA-LET by Histone Deacetylase 3 Contributes to Hypoxia-Mediated Metastasis
- (2013) Fu Yang et al. MOLECULAR CELL
- Structure and function for lncRNAs
- (2013) Louisa Flintoft NATURE REVIEWS GENETICS
- Long non-coding RNAs: new players in cell differentiation and development
- (2013) Alessandro Fatica et al. NATURE REVIEWS GENETICS
- RNA in unexpected places: long non-coding RNA functions in diverse cellular contexts
- (2013) Sarah Geisler et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model
- (2013) Liguo Wang et al. NUCLEIC ACIDS RESEARCH
- Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts
- (2013) Liang Sun et al. NUCLEIC ACIDS RESEARCH
- A Long Noncoding RNA Mediates Both Activation and Repression of Immune Response Genes
- (2013) S. Carpenter et al. SCIENCE
- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
- (2013) Daehwan Kim et al. GENOME BIOLOGY
- Genome-wide identification and initial characterization of bovine long non-coding RNAs from EST data
- (2012) Wen Huang et al. ANIMAL GENETICS
- Expression profiles of microRNAs from lactating and non-lactating bovine mammary glands and identification of miRNA related to lactation
- (2012) Zhen Li et al. BMC GENOMICS
- The Noncoding RNA MALAT1 Is a Critical Regulator of the Metastasis Phenotype of Lung Cancer Cells
- (2012) T. Gutschner et al. CANCER RESEARCH
- The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
- (2012) T. Derrien et al. GENOME RESEARCH
- Supplementation of increasing amounts of linseed oil to dairy cows fed total mixed rations: Effects on digestion, ruminal fermentation characteristics, protozoal populations, and milk fatty acid composition
- (2012) C. Benchaar et al. JOURNAL OF DAIRY SCIENCE
- MicroRNA expression patterns in the bovine mammary gland are affected by stage of lactation1
- (2012) M. Wang et al. JOURNAL OF DAIRY SCIENCE
- Control of somatic tissue differentiation by the long non-coding RNA TINCR
- (2012) Markus Kretz et al. NATURE
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
- (2012) Cole Trapnell et al. Nature Protocols
- MicroRNA-125b Induces Metastasis by Targeting STARD13 in MCF-7 and MDA-MB-231 Breast Cancer Cells
- (2012) Feng Tang et al. PLoS One
- Bovine ncRNAs Are Abundant, Primarily Intergenic, Conserved and Associated with Regulatory Genes
- (2012) Zhipeng Qu et al. PLoS One
- Long Noncoding RNA HOTAIR Regulates Polycomb-Dependent Chromatin Modification and Is Associated with Poor Prognosis in Colorectal Cancers
- (2011) R. Kogo et al. CANCER RESEARCH
- Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
- (2011) M. N. Cabili et al. GENES & DEVELOPMENT
- Effects of feeding rapeseed oil, soybean oil, or linseed oil on stearoyl-CoA desaturase expression in the mammary gland of dairy cows
- (2011) A.A.A. Jacobs et al. JOURNAL OF DAIRY SCIENCE
- Monocyte to macrophage differentiation-associated (MMD) positively regulates ERK and Akt activation and TNF-α and NO production in macrophages
- (2011) Qiang Liu et al. MOLECULAR BIOLOGY REPORTS
- A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression
- (2011) Kevin C. Wang et al. NATURE
- lincRNAs act in the circuitry controlling pluripotency and differentiation
- (2011) Mitchell Guttman et al. NATURE
- NONCODE v3.0: integrative annotation of long noncoding RNAs
- (2011) D. Bu et al. NUCLEIC ACIDS RESEARCH
- SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer
- (2011) M. E. Askarian-Amiri et al. RNA
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
- (2010) Rajnish A. Gupta et al. NATURE
- Long non-coding RNA ANRIL is required for the PRC2 recruitment to and silencing of p15 INK4B tumor suppressor gene
- (2010) Y Kotake et al. ONCOGENE
- Gene ontology analysis for RNA-seq: accounting for selection bias
- (2010) Matthew D Young et al. GENOME BIOLOGY
- ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks
- (2009) Gabriela Bindea et al. BIOINFORMATICS
- Genomic and Transcriptional Co-Localization of Protein-Coding and Long Non-Coding RNA Pairs in the Developing Brain
- (2009) Jasmina Ponjavic et al. PLoS Genetics
- A whole-genome assembly of the domestic cow, Bos taurus
- (2009) Aleksey V Zimin et al. GENOME BIOLOGY
- Oilseed Lipid Supplements and Fatty Acid Composition of Cow Milk: A Meta-Analysis
- (2008) F. Glasser et al. JOURNAL OF DAIRY SCIENCE
- Ripples from neighbouring transcription
- (2008) Miki Ebisuya et al. NATURE CELL BIOLOGY
- Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
- (2008) Da Wei Huang et al. NUCLEIC ACIDS RESEARCH
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now