A combined lipidomic and 16S rRNA gene amplicon sequencing approach reveals archaeal sources of intact polar lipids in the stratified Black Sea water column

Potential recycling of thaumarchaeotal lipids by DPANN Archaea in seasonally hypoxic surface marine sediments

(2018) Yvonne A. Lipsewers et al.   ORGANIC GEOCHEMISTRY

Chemotaxonomic characterisation of the thaumarchaeal lipidome

(2017) Felix J. Elling et al.   ENVIRONMENTAL MICROBIOLOGY

New insights into marine group III Euryarchaeota, from dark to light

(2017) Jose M Haro-Moreno et al.   ISME Journal

Unusual Butane- and Pentanetriol-Based Tetraether Lipids in Methanomassiliicoccus luminyensis, a Representative of the Seventh Order of Methanogens

(2016) Kevin W. Becker et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phylogenomic analysis of lipid biosynthetic genes of Archaea shed light on the ‘lipid divide’

(2016) Laura Villanueva et al.   ENVIRONMENTAL MICROBIOLOGY

Stratification of archaeal membrane lipids in the ocean and implications for adaptation and chemotaxonomy of planktonic archaea

(2016) Chun Zhu et al.   ENVIRONMENTAL MICROBIOLOGY

Metabolic Capabilities of Microorganisms Involved in and Associated with the Anaerobic Oxidation of Methane

(2016) Gunter Wegener et al.   Frontiers in Microbiology

Genomic and enzymatic evidence for acetogenesis among multiple lineages of the archaeal phylum Bathyarchaeota widespread in marine sediments

(2016) Y. He et al.   Nature Microbiology

Abundant Trimethylornithine Lipids and Specific Gene Sequences Are Indicative of Planctomycete Importance at the Oxic/Anoxic Interface in Sphagnum-Dominated Northern Wetlands

(2015) Eli K. Moore et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Unusually low TEX 86 values in the transitional zone between Pearl River estuary and coastal South China Sea: Impact of changing archaeal community composition

(2015) Jin-Xiang Wang et al.   CHEMICAL GEOLOGY

Genomic Expansion of Domain Archaea Highlights Roles for Organisms from New Phyla in Anaerobic Carbon Cycling

(2015) Cindy J. Castelle et al.   CURRENT BIOLOGY

The archaeal lipidome in estuarine sediment dominated by members of the Miscellaneous Crenarchaeotal Group

(2015) Travis B. Meador et al.   ENVIRONMENTAL MICROBIOLOGY

Ecophysiology of uncultivated marine euryarchaea is linked to particulate organic matter

(2015) William D Orsi et al.   ISME Journal

Complex archaea that bridge the gap between prokaryotes and eukaryotes

(2015) Anja Spang et al.   NATURE

Distribution of glycerol ether lipids in halophilic, methanogenic and hyperthermophilic archaea

(2015) Thorsten Bauersachs et al.   ORGANIC GEOCHEMISTRY

Genomic and proteomic characterization of “CandidatusNitrosopelagicus brevis”: An ammonia-oxidizing archaeon from the open ocean

(2015) Alyson E. Santoro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics

(2015) P. N. Evans et al.   SCIENCE

Marine Group II Archaea, potentially important players in the global ocean carbon cycle

(2015) Chuanlun L. Zhang et al.   Frontiers in Microbiology

Oxygen distribution and aerobic respiration in the north and south eastern tropical Pacific oxygen minimum zones

(2014) Laura Tiano et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Effects of growth phase on the membrane lipid composition of the thaumarchaeon Nitrosopumilus maritimus and their implications for archaeal lipid distributions in the marine environment

(2014) Felix J. Elling et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Are Marine Group II Euryarchaeota significant contributors to tetraether lipids in the ocean?

(2014) S. Schouten et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Planktonic Euryarchaeota are a significant source of archaeal tetraether lipids in the ocean

(2014) Sara A. Lincoln et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Thermococcus kodakarensis modulates its polar membrane lipids and elemental composition according to growth stage and phosphate availability

(2014) Travis B. Meador et al.   Frontiers in Microbiology

Caught in the middle with multiple displacement amplification: the myth of pooling for avoiding multiple displacement amplification bias in a metagenome

(2014) Rachel Marine et al.   Microbiome

SUP05 Dominates the Gammaproteobacterial Sulfur Oxidizer Assemblages in Pelagic Redoxclines of the Central Baltic and Black Seas

(2013) Sabine Glaubitz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genetic and functional properties of uncultivated MCG archaea assessed by metagenome and gene expression analyses

(2013) Jun Meng et al.   ISME Journal

Insights into the phylogeny and coding potential of microbial dark matter

(2013) Christian Rinke et al.   NATURE

Predominant archaea in marine sediments degrade detrital proteins

(2013) Karen G. Lloyd et al.   NATURE

Intact Polar and Core Glycerol Dibiphytanyl Glycerol Tetraether Lipids of Group I.1a and I.1b Thaumarchaeota in Soil

(2012) Jaap S. Sinninghe Damsté et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Mono- and dihydroxyl glycerol dibiphytanyl glycerol tetraethers in marine sediments: Identification of both core and intact polar lipid forms

(2012) Xiao-Lei Liu et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Intact polar and core glycerol dibiphytanyl glycerol tetraether lipids in the Arabian Sea oxygen minimum zone. Part II: Selective preservation and degradation in sediments and consequences for the TEX86

(2012) Sabine K. Lengger et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Intact polar and core glycerol dibiphytanyl glycerol tetraether lipids in the Arabian Sea oxygen minimum zone: I. Selective preservation and degradation in the water column and consequences for the TEX86

(2012) Stefan Schouten et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments

(2012) Kyoko Kubo et al.   ISME Journal

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Biomarker evidence for anammox in the oxygen minimum zone of the Eastern Tropical North Pacific

(2012) Darci Rush et al.   ORGANIC GEOCHEMISTRY

PCR Biases Distort Bacterial and Archaeal Community Structure in Pyrosequencing Datasets

(2012) Ameet J. Pinto et al.   PLoS One

Untangling Genomes from Metagenomes: Revealing an Uncultured Class of Marine Euryarchaeota

(2012) V. Iverson et al.   SCIENCE

Core and Intact Polar Glycerol Dibiphytanyl Glycerol Tetraether Lipids of Ammonia-Oxidizing Archaea Enriched from Marine and Estuarine Sediments

(2011) Angela Pitcher et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial diversity and stratification of South Pacific abyssal marine sediments

(2011) Alan M. Durbin et al.   ENVIRONMENTAL MICROBIOLOGY

Stable carbon isotopic compositions of intact polar lipids reveal complex carbon flow patterns among hydrocarbon degrading microbial communities at the Chapopote asphalt volcano

(2011) Florence Schubotz et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Niche segregation of ammonia-oxidizing archaea and anammox bacteria in the Arabian Sea oxygen minimum zone

(2011) Angela Pitcher et al.   ISME Journal

Contribution of crenarchaeal autotrophic ammonia oxidizers to the dark primary production in Tyrrhenian deep waters (Central Mediterranean Sea)

(2011) Michail M Yakimov et al.   ISME Journal

Taxonomic and Functional Metagenomic Profiling of the Microbial Community in the Anoxic Sediment of a Sub-saline Shallow Lake (Laguna de Carrizo, Central Spain)

(2011) Manuel Ferrer et al.   MICROBIAL ECOLOGY

Diversity and Spatial Distribution of Prokaryotic Communities Along A Sediment Vertical Profile of A Deep-Sea Mud Volcano

(2011) Maria G. Pachiadaki et al.   MICROBIAL ECOLOGY

A review of molecular organic proxies for examining modern and ancient lacustrine environments

(2011) Isla S. Castañeda et al.   QUATERNARY SCIENCE REVIEWS

Systematic fragmentation patterns of archaeal intact polar lipids by high-performance liquid chromatography/electrospray ionization ion-trap mass spectrometry

(2011) Marcos Y. Yoshinaga et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Fossilization and degradation of intact polar lipids in deep subsurface sediments: A theoretical approach

(2010) Stefan Schouten et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Factors controlling the distribution of anaerobic methanotrophic communities in marine environments: Evidence from intact polar membrane lipids

(2010) Pamela E. Rossel et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Relevance of a crenarchaeotal subcluster related to Candidatus Nitrosopumilus maritimus to ammonia oxidation in the suboxic zone of the central Baltic Sea

(2010) Matthias Labrenz et al.   ISME Journal

Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara

(2010) Achim Quaiser et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota

(2010) Anja Spang et al.   TRENDS IN MICROBIOLOGY

Detection of microbial biomass by intact polar membrane lipid analysis in the water column and surface sediments of the Black Sea

(2009) Florence Schubotz et al.   ENVIRONMENTAL MICROBIOLOGY

Structural diversity and fate of intact polar lipids in marine sediments

(2009) Julius Sebastian Lipp et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Intact Membrane Lipids of "Candidatus Nitrosopumilus maritimus," a Cultivated Representative of the Cosmopolitan Mesophilic Group I Crenarchaeota

(2008) S. Schouten et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Epsilonproteobacteria Represent the Major Portion of Chemoautotrophic Bacteria in Sulfidic Waters of Pelagic Redoxclines of the Baltic and Black Seas

(2008) J. Grote et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity and Stratification of Archaea in a Hypersaline Microbial Mat

(2008) C. E. Robertson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Molecular proxies for paleoclimatology

(2008) Timothy I. Eglinton et al.   EARTH AND PLANETARY SCIENCE LETTERS

Proteomic analysis of secreted membrane vesicles of archaeal Sulfolobus species reveals the presence of endosome sorting complex components

(2008) Albert F. Ellen et al.   EXTREMOPHILES

Prokaryotic biodiversity and activity in the deep subseafloor biosphere

(2008) John C. Fry et al.   FEMS MICROBIOLOGY ECOLOGY

Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota

(2008) Céline Brochier-Armanet et al.   NATURE REVIEWS MICROBIOLOGY

Intact polar lipids of anaerobic methanotrophic archaea and associated bacteria

(2008) Pamela E. Rossel et al.   ORGANIC GEOCHEMISTRY