Phylogenomic analysis of lipid biosynthetic genes of Archaea shed light on the ‘lipid divide’

Genomic Expansion of Domain Archaea Highlights Roles for Organisms from New Phyla in Anaerobic Carbon Cycling

(2015) Cindy J. Castelle et al.   CURRENT BIOLOGY

Unusual biology across a group comprising more than 15% of domain Bacteria

(2015) Christopher T. Brown et al.   NATURE

Complex archaea that bridge the gap between prokaryotes and eukaryotes

(2015) Anja Spang et al.   NATURE

Bacterial gene import and mesophilic adaptation in archaea

(2015) Purificación López-García et al.   NATURE REVIEWS MICROBIOLOGY

Genomic and proteomic characterization of “CandidatusNitrosopelagicus brevis”: An ammonia-oxidizing archaeon from the open ocean

(2015) Alyson E. Santoro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Mesophilic, Autotrophic, Ammonia-Oxidizing Archaeon of Thaumarchaeal Group I.1a Cultivated from a Deep Oligotrophic Soil Horizon

(2014) Man-Young Jung et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ether- and Ester-Boundiso-Diabolic Acid and Other Lipids in Members of Acidobacteria Subdivision 4

(2014) Jaap S. Sinninghe Damsté et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phylogenomic reconstruction of archaeal fatty acid metabolism

(2014) Daria V. Dibrova et al.   ENVIRONMENTAL MICROBIOLOGY

Pangenome Evidence for Extensive Interdomain Horizontal Transfer Affecting Lineage Core and Shell Genes in Uncultured Planktonic Thaumarchaeota and Euryarchaeota

(2014) Philippe Deschamps et al.   Genome Biology and Evolution

A comprehensive analysis of the geranylgeranylglyceryl phosphate synthase enzyme family identifies novel members and reveals mechanisms of substrate specificity and quaternary structure organization

(2014) David Peterhoff et al.   MOLECULAR MICROBIOLOGY

A re-evaluation of the archaeal membrane lipid biosynthetic pathway

(2014) Laura Villanueva et al.   NATURE REVIEWS MICROBIOLOGY

A Bioenergetic Basis for Membrane Divergence in Archaea and Bacteria

(2014) Víctor Sojo et al.   PLOS BIOLOGY

From archaeon to eukaryote: the evolutionary dark ages of the eukaryotic cell

(2013) Joran Martijn et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Predominant archaea in marine sediments degrade detrital proteins

(2013) Karen G. Lloyd et al.   NATURE

Enrichment and Genome Sequence of the Group I.1a Ammonia-Oxidizing Archaeon “Ca. Nitrosotenuis uzonensis” Representing a Clade Globally Distributed in Thermal Habitats

(2013) Elena V. Lebedeva et al.   PLoS One

Acquisition of 1,000 eubacterial genes physiologically transformed a methanogen at the origin of Haloarchaea

(2012) S. Nelson-Sathi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A congruent phylogenomic signal places eukaryotes within the Archaea

(2012) T. A. Williams et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Extending the known range of glycerol ether lipids in the environment: structural assignments based on tandem mass spectral fragmentation patterns

(2012) Xiao-Lei Liu et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Untangling Genomes from Metagenomes: Revealing an Uncultured Class of Marine Euryarchaeota

(2012) V. Iverson et al.   SCIENCE

Phylogenomic Investigation of Phospholipid Synthesis in Archaea

(2012) Jonathan Lombard et al.   ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL

13,16-Dimethyl Octacosanedioic Acid (iso-Diabolic Acid), a Common Membrane-Spanning Lipid of Acidobacteria Subdivisions 1 and 3

(2011) Jaap S. Sinninghe Damsté et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Stability of Heterochiral Hybrid Membrane Made of Bacterialsn-G3P Lipids and Archaealsn-G1P Lipids

(2011) Haruo Shimada et al.   BIOCHEMISTRY

Phylogeny and evolution of the Archaea: one hundred genomes later

(2011) Celine Brochier-Armanet et al.   CURRENT OPINION IN MICROBIOLOGY

The archaeal ‘TACK’ superphylum and the origin of eukaryotes

(2011) Lionel Guy et al.   TRENDS IN MICROBIOLOGY

Isoprenoid biosynthesis in Archaea – Biochemical and evolutionary implications

(2010) Rie Matsumi et al.   RESEARCH IN MICROBIOLOGY

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales

(2009) O. Zhaxybayeva et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification and Characterization of a Bacterial Glycerol-1-phosphate Dehydrogenase: Ni2+-Dependent AraM fromBacillus subtilis†

(2008) Harald Guldan et al.   BIOCHEMISTRY