Full-length transcript sequencing and comparative transcriptomic analysis to evaluate the contribution of osmotic and ionic stress components towards salinity tolerance in the roots of cultivated alfalfa (Medicago sativa L.)

Comparative analysis of alfalfa (Medicago sativa L.) leaf transcriptomes reveals genotype-specific salt tolerance mechanisms

(2018) Yunting Lei et al.   BMC PLANT BIOLOGY

Transcriptome sequencing and comparative analysis of differentially-expressed isoforms in the roots of Halogeton glomeratus under salt stress

(2018) Lirong Yao et al.   GENE

Transcriptome analysis of flax ( Linum usitatissimum L.) undergoing osmotic stress

(2018) Jianzhong Wu et al.   INDUSTRIAL CROPS AND PRODUCTS

A novel family of transcription factors conserved in angiosperms is required for ABA signalling

(2017) Hainan Tian et al.   PLANT CELL AND ENVIRONMENT

Transcriptome dynamics of Camellia sinensis in response to continuous salinity and drought stress

(2017) Qing Zhang et al.   Tree Genetics & Genomes

Overexpression of OsHSP18.0-CI Enhances Resistance to Bacterial Leaf Streak in Rice

(2017) Yanhu Ju et al.   Rice

Global Gene Expression Analysis Reveals Crosstalk between Response Mechanisms to Cold and Drought Stresses in Cassava Seedlings

(2017) Shuxia Li et al.   Frontiers in Plant Science

Transcriptome Analyses Reveal Candidate Genes Potentially Involved in Al Stress Response in Alfalfa

(2017) Wenxian Liu et al.   Frontiers in Plant Science

Transcriptome Analyses Reveal Candidate Pod Shattering-Associated Genes Involved in the Pod Ventral Sutures of Common Vetch (Vicia sativa L.)

(2017) Rui Dong et al.   Frontiers in Plant Science

Abiotic Stress Signaling and Responses in Plants

(2016) Jian-Kang Zhu   CELL

Deep-sequencing transcriptome analysis of field-grown Medicago sativa L. crown buds acclimated to freezing stress

(2016) Lili Song et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Root transcriptome sequencing and differentially expressed drought-responsive genes in the Platycladus orientalis (L.)

(2016) Sheng Zhang et al.   Tree Genetics & Genomes

A survey of the sorghum transcriptome using single-molecule long reads

(2016) Salah E. Abdel-Ghany et al.   Nature Communications

Stress-induced and epigenetic-mediated maize transcriptome regulation study by means of transcriptome reannotation and differential expression analysis

(2016) Cristian Forestan et al.   Scientific Reports

Development and cross-species transferability of EST-SSR markers in Siberian wildrye (Elymus sibiricus L.) using Illumina sequencing

(2016) Qiang Zhou et al.   Scientific Reports

De Novo Transcriptional Analysis of Alfalfa in Response to Saline-Alkaline Stress

(2016) Yi-Min An et al.   Frontiers in Plant Science

Comparative Proteomic Analysis Reveals Differential Root Proteins in Medicago sativa and Medicago truncatula in Response to Salt Stress

(2016) Ruicai Long et al.   Frontiers in Plant Science

Single-molecule real-time transcript sequencing facilitates common wheat genome annotation and grain transcriptome research

(2015) Lingli Dong et al.   BMC GENOMICS

Novel Polymorphic Expressed-Sequence Tag–Simple-Sequence Repeat Markers in for Genetic Diversity Analyses

(2015) Dong Luo et al.   CROP SCIENCE

Co-expression of tonoplast Cation/H+antiporter and H+-pyrophosphatase from xerophyteZygophyllum xanthoxylumimproves alfalfa plant growth under salinity, drought and field conditions

(2015) Ai-Ke Bao et al.   PLANT BIOTECHNOLOGY JOURNAL

The Roles of ROS and ABA in Systemic Acquired Acclimation

(2015) Ron Mittler et al.   PLANT CELL

Global transcriptome profiling analysis reveals insight into saliva-responsive genes in alfalfa

(2015) Wenxian Liu et al.   PLANT CELL REPORTS

The role of the CBL–CIPK calcium signalling network in regulating ion transport in response to abiotic stress

(2015) Emily Laurina Thoday-Kennedy et al.   PLANT GROWTH REGULATION

Full-length transcriptome sequences and splice variants obtained by a combination of sequencing platforms applied to different root tissues ofSalvia miltiorrhizaand tanshinone biosynthesis

(2015) Zhichao Xu et al.   PLANT JOURNAL

PacBio Sequencing and Its Applications

(2015) Anthony Rhoads et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Selecting Alfalfa Cultivars for Salt Tolerance Based on Some Physiochemical Traits

(2014) Ensyie Ashrafi et al.   AGRONOMY JOURNAL

Comparative transcriptome profiling of a desert evergreen shrub, Ammopiptanthus mongolicus, in response to drought and cold stresses

(2014) Yaqi Wu et al.   BMC GENOMICS

Salicornia europaea L. Na+/H+ antiporter gene improves salt tolerance in transgenic alfalfa (Medicago sativa L.)

(2014) L.Q. Zhang et al.   GENETICS AND MOLECULAR RESEARCH

Comparative physiological, metabolomic, and transcriptomic analyses reveal mechanisms of improved abiotic stress resistance in bermudagrass [Cynodon dactylon (L). Pers.] by exogenous melatonin

(2014) Haitao Shi et al.   JOURNAL OF EXPERIMENTAL BOTANY

Metabolic response of maize (Zea mays L.) plants to combined drought and salt stress

(2014) Caixia Sun et al.   PLANT AND SOIL

Overexpression of Glycine soja WRKY20 enhances both drought and salt tolerance in transgenic alfalfa (Medicago sativa L.)

(2014) Lili Tang et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Transgenic alfalfa plants expressing AtNDPK2 exhibit increased growth and tolerance to abiotic stresses

(2014) Zhi Wang et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Overexpression of a stress-responsive MYB transcription factor of Poncirus trifoliata confers enhanced dehydration tolerance and increases polyamine biosynthesis

(2014) Peipei Sun et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Overexpression of codA gene confers enhanced tolerance to abiotic stresses in alfalfa

(2014) Hongbing Li et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Development of a rapid one-step PCR protocol to distinguish between alfalfa (Medicago sativa) and sweet clover (Melilotus spp.) seeds

(2014) D. Luo et al.   SEED SCIENCE AND TECHNOLOGY

Plant salt-tolerance mechanisms

(2014) Ulrich Deinlein et al.   TRENDS IN PLANT SCIENCE

Analysis of the Alfalfa Root Transcriptome in Response to Salinity Stress

(2013) Olga A. Postnikova et al.   PLANT AND CELL PHYSIOLOGY

The CBL–CIPK network mediates different signaling pathways in plants

(2013) Qinyang Yu et al.   PLANT CELL REPORTS

Global Transcriptome Sequencing Using the Illumina Platform and the Development of EST-SSR Markers in Autotetraploid Alfalfa

(2013) Zhipeng Liu et al.   PLoS One

Expression profiling of ABA pathway transcripts indicates crosstalk between abiotic and biotic stress responses in Arabidopsis

(2012) Zhulong Chan   GENOMICS

A R2R3-type MYB gene, OsMYB2, is involved in salt, cold, and dehydration tolerance in rice

(2012) An Yang et al.   JOURNAL OF EXPERIMENTAL BOTANY

HbCIPK2, a novel CBL-interacting protein kinase from halophyte Hordeum brevisubulatum, confers salt and osmotic stress tolerance

(2012) RUIFEN LI et al.   PLANT CELL AND ENVIRONMENT

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Differential expression in RNA-seq: A matter of depth

(2011) S. Tarazona et al.   GENOME RESEARCH

Signal transduction during cold, salt, and drought stresses in plants

(2011) Guo-Tao Huang et al.   MOLECULAR BIOLOGY REPORTS

Association Mapping of Biomass Yield and Stem Composition in a Tetraploid Alfalfa Breeding Population

(2011) Xuehui Li et al.   Plant Genome

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Stress-inducible expression of GmDREB1 conferred salt tolerance in transgenic alfalfa

(2009) Taicheng Jin et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Effect of abiotic stresses on glutathione peroxidase and glutathione S-transferase activity in barley root tips

(2009) L’ubica Halušková et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY