Elucidating gene function and function evolution through comparison of co-expression networks of plants
Published 2014 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Elucidating gene function and function evolution through comparison of co-expression networks of plants
Authors
Keywords
-
Journal
Frontiers in Plant Science
Volume 5, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2014-08-19
DOI
10.3389/fpls.2014.00394
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- The Cell Biology of Cellulose Synthesis
- (2014) Heather E. McFarlane et al. Annual Review of Plant Biology
- A large-scale evaluation of computational protein function prediction
- (2013) Predrag Radivojac et al. NATURE METHODS
- Identification of Arabidopsis BAK1-Associating Receptor-Like Kinase 1 (BARK1) and Characterization of its Gene Expression and Brassinosteroid-Regulated Root Phenotypes
- (2013) Min Hee Kim et al. PLANT AND CELL PHYSIOLOGY
- Data Integration through Proximity-Based Networks Provides Biological Principles of Organization across Scales
- (2013) S. Kleessen et al. PLANT CELL
- Genomic Clues to the Ancestral Flowering Plant
- (2013) K. Adams SCIENCE
- Towards revealing the functions of all genes in plants
- (2013) Seung Yon Rhee et al. TRENDS IN PLANT SCIENCE
- The origin of the plant body axis
- (2012) Minako Ueda et al. CURRENT OPINION IN PLANT BIOLOGY
- Co-expression Analysis Identifies CRC and AP1 the Regulator of Arabidopsis Fatty Acid Biosynthesis
- (2012) Xinxin Han et al. Journal of Integrative Plant Biology
- Three Arabidopsis DUF579 Domain-Containing GXM Proteins are Methyltransferases Catalyzing 4-O-Methylation of Glucuronic Acid on Xylan
- (2012) C. Lee et al. PLANT AND CELL PHYSIOLOGY
- CHITINASE-LIKE1/POM-POM1 and Its Homolog CTL2 Are Glucan-Interacting Proteins Important for Cellulose Biosynthesis in Arabidopsis
- (2012) C. Sanchez-Rodriguez et al. PLANT CELL
- POM-POM2/CELLULOSE SYNTHASE INTERACTING1 Is Essential for the Functional Association of Cellulose Synthase and Microtubules in Arabidopsis
- (2012) M. Bringmann et al. PLANT CELL
- Comparative co-expression analysis in plant biology
- (2012) SARA MOVAHEDI et al. PLANT CELL AND ENVIRONMENT
- BAR expressolog identification: expression profile similarity ranking of homologous genes in plant species
- (2012) Rohan V. Patel et al. PLANT JOURNAL
- Moss cell walls: structure and biosynthesis
- (2012) Alison W. Roberts et al. Frontiers in Plant Science
- The CELLULOSE SYNTHASE-LIKE A and CELLULOSE SYNTHASE-LIKE C families: recent advances and future perspectives
- (2012) Aaron H. Liepman et al. Frontiers in Plant Science
- Plant Glycosyltransferases Beyond CAZy: A Perspective on DUF Families
- (2012) Sara Fasmer Hansen et al. Frontiers in Plant Science
- PlaNet: Combined Sequence and Expression Comparisons across Plant Networks Derived from Seven Species
- (2011) M. Mutwil et al. PLANT CELL
- Dissecting Plant Genomes with the PLAZA Comparative Genomics Platform
- (2011) M. Van Bel et al. PLANT PHYSIOLOGY
- Comparative Network Analysis Reveals That Tissue Specificity and Gene Function Are Important Factors Influencing the Mode of Expression Evolution in Arabidopsis and Rice
- (2011) S. Movahedi et al. PLANT PHYSIOLOGY
- SLocX: predicting subcellular localization of Arabidopsis proteins leveraging gene expression data
- (2011) Malgorzata Ryngajllo Frontiers in Plant Science
- Large-Scale Co-Expression Approach to Dissect Secondary Cell Wall Formation Across Plant Species
- (2011) Colin Ruprecht et al. Frontiers in Plant Science
- Hemicelluloses
- (2010) Henrik Vibe Scheller et al. Annual Review of Plant Biology
- CoP: a database for characterizing co-expressed gene modules with biological information in plants
- (2010) Y. Ogata et al. BIOINFORMATICS
- Network-based function prediction and interactomics: The case for metabolic enzymes
- (2010) S.C. Janga et al. METABOLIC ENGINEERING
- Rational association of genes with traits using a genome-scale gene network for Arabidopsis thaliana
- (2010) Insuk Lee et al. NATURE BIOTECHNOLOGY
- Prephenate aminotransferase directs plant phenylalanine biosynthesis via arogenate
- (2010) Hiroshi Maeda et al. Nature Chemical Biology
- Fasciclin-like arabinogalactan proteins: specialization for stem biomechanics and cell wall architecture in Arabidopsis and Eucalyptus
- (2010) Colleen P. MacMillan et al. PLANT JOURNAL
- Arabidopsis - a powerful model system for plant cell wall research
- (2010) Aaron H. Liepman et al. PLANT JOURNAL
- Genome-Wide Computational Function Prediction of Arabidopsis Proteins by Integration of Multiple Data Sources
- (2010) Y. A. I. Kourmpetis et al. PLANT PHYSIOLOGY
- Identification of a cellulose synthase-associated protein required for cellulose biosynthesis
- (2010) Y. Gu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- FERONIA receptor-like kinase regulates RHO GTPase signaling of root hair development
- (2010) Qiaohong Duan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- STARNET 2: a web-based tool for accelerating discovery of gene regulatory networks using microarray co-expression data
- (2009) Daniel Jupiter et al. BMC BIOINFORMATICS
- The cellulose synthase superfamily in fully sequenced plants and algae
- (2009) Yanbin Yin et al. BMC PLANT BIOLOGY
- Transcriptional Wiring of Cell Wall-Related Genes in Arabidopsis
- (2009) Marek Mutwil et al. Molecular Plant
- Co-expression tools for plant biology: opportunities for hypothesis generation and caveats
- (2009) BJ��RN USADEL et al. PLANT CELL AND ENVIRONMENT
- Selaginella and 400 Million Years of Separation
- (2008) Jo Ann Banks Annual Review of Plant Biology
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: Confirmed actors and newcomers
- (2008) Muhammad Irshad et al. BMC PLANT BIOLOGY
- Laying down the bricks: logistic aspects of cell wall biosynthesis
- (2008) Daniela A Geisler et al. CURRENT OPINION IN PLANT BIOLOGY
- GeneCAT—novel webtools that combine BLAST and co-expression analyses
- (2008) Marek Mutwil et al. NUCLEIC ACIDS RESEARCH
- A Battery of Transcription Factors Involved in the Regulation of Secondary Cell Wall Biosynthesis in Arabidopsis
- (2008) R. Zhong et al. PLANT CELL
- Cysteine proteases XCP1 and XCP2 aid micro-autolysis within the intact central vacuole during xylogenesis in Arabidopsis roots
- (2008) Utku Avci et al. PLANT JOURNAL
- Characterization of IRX10 and IRX10-like reveals an essential role in glucuronoxylan biosynthesis in Arabidopsis
- (2008) David M. Brown et al. PLANT JOURNAL
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started