- Home
- Publications
- Publication Search
- Publication Details
Title
Comparative co-expression analysis in plant biology
Authors
Keywords
-
Journal
PLANT CELL AND ENVIRONMENT
Volume 35, Issue 10, Pages 1787-1798
Publisher
Wiley
Online
2012-04-11
DOI
10.1111/j.1365-3040.2012.02517.x
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Differential expression in RNA-seq: A matter of depth
- (2011) S. Tarazona et al. GENOME RESEARCH
- PlaNet: Combined Sequence and Expression Comparisons across Plant Networks Derived from Seven Species
- (2011) M. Mutwil et al. PLANT CELL
- Dissecting Plant Genomes with the PLAZA Comparative Genomics Platform
- (2011) M. Van Bel et al. PLANT PHYSIOLOGY
- Comparative Network Analysis Reveals That Tissue Specificity and Gene Function Are Important Factors Influencing the Mode of Expression Evolution in Arabidopsis and Rice
- (2011) S. Movahedi et al. PLANT PHYSIOLOGY
- Gene Coexpression Network Alignment and Conservation of Gene Modules between Two Grass Species: Maize and Rice
- (2011) S. P. Ficklin et al. PLANT PHYSIOLOGY
- Plant protein-coding gene families: emerging bioinformatics approaches
- (2011) Manuel Martinez TRENDS IN PLANT SCIENCE
- Accurate Quantification of Functional Analogy among Close Homologs
- (2011) Maria D. Chikina et al. PLoS Computational Biology
- CoP: a database for characterizing co-expressed gene modules with biological information in plants
- (2010) Y. Ogata et al. BIOINFORMATICS
- Cytoscape 2.8: new features for data integration and network visualization
- (2010) M. E. Smoot et al. BIOINFORMATICS
- TobEA: an atlas of tobacco gene expression from seed to senescence
- (2010) Kieron D Edwards et al. BMC GENOMICS
- COMODO: an adaptive coclustering strategy to identify conserved coexpression modules between organisms
- (2010) Peyman Zarrineh et al. NUCLEIC ACIDS RESEARCH
- ArrayExpress update--an archive of microarray and high-throughput sequencing-based functional genomics experiments
- (2010) H. Parkinson et al. NUCLEIC ACIDS RESEARCH
- Database resources of the National Center for Biotechnology Information
- (2010) E. W. Sayers et al. NUCLEIC ACIDS RESEARCH
- CORNET: A User-Friendly Tool for Data Mining and Integration
- (2010) S. De Bodt et al. PLANT PHYSIOLOGY
- Cross-Kingdom Comparison of Transcriptomic Adjustments to Low-Oxygen Stress Highlights Conserved and Plant-Specific Responses
- (2010) A. Mustroph et al. PLANT PHYSIOLOGY
- A regulon conserved in monocot and dicot plants defines a functional module in antifungal plant immunity
- (2010) M. Humphry et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The MCM-Binding Protein ETG1 Aids Sister Chromatid Cohesion Required for Postreplicative Homologous Recombination Repair
- (2010) Naoki Takahashi et al. PLoS Genetics
- Cross species analysis of microarray expression data
- (2009) Y. Lu et al. BIOINFORMATICS
- STARNET 2: a web-based tool for accelerating discovery of gene regulatory networks using microarray co-expression data
- (2009) Daniel Jupiter et al. BMC BIOINFORMATICS
- A transcriptome atlas of rice cell types uncovers cellular, functional and developmental hierarchies
- (2009) Yuling Jiao et al. NATURE GENETICS
- KEGG for representation and analysis of molecular networks involving diseases and drugs
- (2009) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- InParanoid 7: new algorithms and tools for eukaryotic orthology analysis
- (2009) G. Ostlund et al. NUCLEIC ACIDS RESEARCH
- The Pfam protein families database
- (2009) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- PLAZA: A Comparative Genomics Resource to Study Gene and Genome Evolution in Plants
- (2009) S. Proost et al. PLANT CELL
- A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize
- (2009) BJÖRN USADEL et al. PLANT CELL AND ENVIRONMENT
- Co-expression tools for plant biology: opportunities for hypothesis generation and caveats
- (2009) BJ��RN USADEL et al. PLANT CELL AND ENVIRONMENT
- A dynamic gene expression atlas covering the entire life cycle of rice
- (2009) Lei Wang et al. PLANT JOURNAL
- Assembly of an Interactive Correlation Network for the Arabidopsis Genome Using a Novel Heuristic Clustering Algorithm
- (2009) M. Mutwil et al. PLANT PHYSIOLOGY
- Unraveling Transcriptional Control in Arabidopsis Using cis-Regulatory Elements and Coexpression Networks
- (2009) K. Vandepoele et al. PLANT PHYSIOLOGY
- The flowering world: a tale of duplications
- (2009) Yves Van de Peer et al. TRENDS IN PLANT SCIENCE
- WGCNA: an R package for weighted correlation network analysis
- (2008) Peter Langfelder et al. BMC BIOINFORMATICS
- A cross-species transcriptomics approach to identify genes involved in leaf development
- (2008) Nathaniel Street et al. BMC GENOMICS
- Meta Analysis of Gene Expression Data within and Across Species
- (2008) Ana Fierro et al. CURRENT GENOMICS
- Hydrogen Peroxide-Induced Gene Expression across Kingdoms: A Comparative Analysis
- (2008) K. Vandenbroucke et al. MOLECULAR BIOLOGY AND EVOLUTION
- Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
- (2008) Da Wei Huang et al. NUCLEIC ACIDS RESEARCH
- Arabidopsis Reactome: A Foundation Knowledgebase for Plant Systems Biology
- (2008) N. Tsesmetzis et al. PLANT CELL
- A gene expression atlas of the model legumeMedicago truncatula
- (2008) Vagner A. Benedito et al. PLANT JOURNAL
- Finding and Comparing Syntenic Regions among Arabidopsis and the Outgroups Papaya, Poplar, and Grape: CoGe with Rosids
- (2008) E. Lyons et al. PLANT PHYSIOLOGY
- The quest for orthologs: finding the corresponding gene across genomes
- (2008) Arnold Kuzniar et al. TRENDS IN GENETICS
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now