A Nematode of the Mid-Atlantic Ridge Hydrothermal Vents Harbors a Possible Symbiotic Relationship

Biodiversity and ecology of meiofauna in extreme and changing environments

(2018) Daniela Zeppilli et al.   Marine Biodiversity

A specific and widespread association between deep-seaBathymodiolusmussels and a novel family of Epsilonproteobacteria

(2016) Adrien Assié et al.   Environmental Microbiology Reports

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Chemosynthetic symbionts of marine invertebrate animals are capable of nitrogen fixation

(2016) Jillian M. Petersen et al.   Nature Microbiology

Error filtering, pair assembly and error correction for next-generation sequencing reads

(2015) Robert C. Edgar et al.   BIOINFORMATICS

Relative abundances of methane- and sulfur-oxidizing symbionts in gills of the deep-sea hydrothermal vent mussel Bathymodiolus azoricus under pressure

(2015) Kamil M. Szafranski et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Biodiversity patterns, environmental drivers and indicator species on a high-temperature hydrothermal edifice, Mid-Atlantic Ridge

(2015) Jozée Sarrazin et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Rapid colonisation by nematodes on organic and inorganic substrata deployed at the deep-sea Lucky Strike hydrothermal vent field (Mid-Atlantic Ridge)

(2015) Daniela Zeppilli et al.   Marine Biodiversity

Is the meiofauna a good indicator for climate change and anthropogenic impacts?

(2015) Daniela Zeppilli et al.   Marine Biodiversity

The gill chamber epibiosis of deep-sea shrimpRimicarisexoculata: an in-depth metagenomic investigation and discovery ofZetaproteobacteria

(2014) Cyrielle Jan et al.   ENVIRONMENTAL MICROBIOLOGY

Site-related differences in gene expression and bacterial densities in the mussel Bathymodiolus azoricus from the Menez Gwen and Lucky Strike deep-sea hydrothermal vent sites

(2014) Raul Bettencourt et al.   FISH & SHELLFISH IMMUNOLOGY

Rhythms and Community Dynamics of a Hydrothermal Tubeworm Assemblage at Main Endeavour Field – A Multidisciplinary Deep-Sea Observatory Approach

(2014) Daphne Cuvelier et al.   PLoS One

Swarm: robust and fast clustering method for amplicon-based studies

(2014) Frédéric Mahé et al.   PeerJ

An improved dual-indexing approach for multiplexed 16S rRNA gene sequencing on the Illumina MiSeq platform

(2014) Douglas W Fadrosh et al.   Microbiome

Mining of deep-sea seafloor massive sulfides: A review of the deposits, their benthic communities, impacts from mining, regulatory frameworks and management strategies

(2013) R.E. Boschen et al.   OCEAN & COASTAL MANAGEMENT

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Inorganic carbon fixation by chemosynthetic ectosymbionts and nutritional transfers to the hydrothermal vent host-shrimp Rimicaris exoculata

(2012) Julie Ponsard et al.   ISME Journal

Marine free-living nematodes associated with symbiotic bacteria in deep-sea canyons of north-east Atlantic Ocean

(2012) Alexei V. Tchesunov et al.   JOURNAL OF THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Pockmarks enhance deep-sea benthic biodiversity: a case study in the western Mediterranean Sea

(2011) Daniela Zeppilli et al.   DIVERSITY AND DISTRIBUTIONS

Sequence variability of the pattern recognition receptor Mermaid mediates specificity of marine nematode symbioses

(2011) Silvia Bulgheresi et al.   ISME Journal

Hydrothermal faunal assemblages and habitat characterisation at the Eiffel Tower edifice (Lucky Strike, Mid-Atlantic Ridge)

(2011) Daphne Cuvelier et al.   Marine Ecology-An Evolutionary Perspective

Pathways of Carbon and Energy Metabolism of the Epibiotic Community Associated with the Deep-Sea Hydrothermal Vent Shrimp Rimicaris exoculata

(2011) Michael Hügler et al.   PLoS One

Meiofauna in the Gollum Channels and the Whittard Canyon, Celtic Margin—How Local Environmental Conditions Shape Nematode Structure and Function

(2011) Jeroen Ingels et al.   PLoS One

An insight into the feeding ecology of deep-sea canyon nematodes — Results from field observations and the first in-situ 13C feeding experiment in the Nazaré Canyon

(2010) Jeroen Ingels et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Nematode diversity and its relation to the quantity and quality of sedimentary organic matter in the deep Nazaré Canyon, Western Iberian Margin

(2009) Jeroen Ingels et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Dual symbiosis of the vent shrimpRimicaris exoculatawith filamentous gamma- and epsilonproteobacteria at four Mid-Atlantic Ridge hydrothermal vent fields

(2009) Jillian M. Petersen et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial diversity associated with the hydrothermal shrimpRimicaris exoculatagut and occurrence of a resident microbial community

(2009) Lucile Durand et al.   FEMS MICROBIOLOGY ECOLOGY

Recent volcanic events and the distribution of hydrothermal venting at the Lucky Strike hydrothermal field, Mid-Atlantic Ridge

(2009) H. Ondréas et al.   GEOCHEMISTRY GEOPHYSICS GEOSYSTEMS

Symbioses between deep-sea mussels (Mytilidae: Bathymodiolinae) and chemosynthetic bacteria: diversity, function and evolution

(2008) Sébastien Duperron et al.   COMPTES RENDUS BIOLOGIES

New insigths on the metabolic diversity among the epibiotic microbial communitiy of the hydrothermal shrimp Rimicaris exoculata

(2008) Magali Zbinden et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Symbiotic diversity in marine animals: the art of harnessing chemosynthesis

(2008) Nicole Dubilier et al.   NATURE REVIEWS MICROBIOLOGY