Elucidation of Zymomonas mobilis physiology and stress responses by quantitative proteomics and transcriptomics

Clostridium thermocellum transcriptomic profiles after exposure to furfural or heat stress

(2013) Charlotte M Wilson et al.   Biotechnology for Biofuels

Kinetic modelling of the Zymomonas mobilis Entner-Doudoroff pathway: insights into control and functionality

(2013) R. Rutkis et al.   MICROBIOLOGY-SGM

Dissecting a complex chemical stress: chemogenomic profiling of plant hydrolysates

(2013) J. M. Skerker et al.   Molecular Systems Biology

Systems Biology Analysis of Zymomonas mobilis ZM4 Ethanol Stress Responses

(2013) Shihui Yang et al.   PLoS One

Transcriptome profiling of Zymomonas mobilis under furfural stress

(2012) Ming-xiong He et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Genome-wide transcriptomic analysis of a flocculent strain of Zymomonas mobilis

(2012) Young Jae Jeon et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Transcriptome profiling of Zymomonas mobilis under ethanol stress

(2012) Ming-xiong He et al.   Biotechnology for Biofuels

Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress

(2012) Shihui Yang et al.   BMC GENOMICS

Complete Genome Sequence of the Ethanol-Producing Zymomonas mobilis subsp. mobilis Centrotype ATCC 29191

(2012) A. Desiniotis et al.   JOURNAL OF BACTERIOLOGY

Discovery and characterization of a xylose reductase from Zymomonas mobilis ZM4

(2011) Manoj Agrawal et al.   BIOTECHNOLOGY LETTERS

Genome Sequence of the Ethanol-Producing Zymomonas mobilis subsp. mobilis Lectotype Strain ATCC 10988

(2011) K. M. Pappas et al.   JOURNAL OF BACTERIOLOGY

Genome Sequence of the Ethanol-Producing Zymomonas mobilis subsp. pomaceae Lectotype Strain ATCC 29192

(2011) V. N. Kouvelis et al.   JOURNAL OF BACTERIOLOGY

Respiration-deficient mutants of Zymomonas mobilis show improved growth and ethanol fermentation under aerobic and high temperature conditions

(2011) Takeshi Hayashi et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Heterologous Expression and Extracellular Secretion of Cellulolytic Enzymes by Zymomonas mobilis

(2010) J. G. Linger et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

DNA restriction-modification systems in the ethanologen, Zymomonas mobilis ZM4

(2010) Aidan L. Kerr et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Genome-scale modeling and in silico analysis of ethanologenic bacteria Zymomonas mobilis

(2010) Hanifah Widiastuti et al.   BIOTECHNOLOGY AND BIOENGINEERING

The Zymomonas mobilis regulator hfq contributes to tolerance against multiple lignocellulosic pretreatment inhibitors

(2010) Shihui Yang et al.   BMC MICROBIOLOGY

irrE, an Exogenous Gene from Deinococcus radiodurans, improves the Growth of and Ethanol Production by a Zymomonas mobilis Strain under Ethanol and Acid Stresses

(2010) Ming Chen   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

Advances in shotgun proteomics and the analysis of membrane proteomes

(2010) Joshua M. Gilmore et al.   Journal of Proteomics

The genome-scale metabolic network analysis of Zymomonas mobilis ZM4 explains physiological features and suggests ethanol and succinic acid production strategies

(2010) Kyung Lee et al.   Microbial Cell Factories

Paradigm for industrial strain improvement identifies sodium acetate tolerance loci in Zymomonas mobilis and Saccharomyces cerevisiae

(2010) S. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transcriptomic and metabolomic profiling of Zymomonas mobilis during aerobic and anaerobic fermentations

(2009) Shihui Yang et al.   BMC GENOMICS

Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology

(2009) P. D. Karp et al.   BRIEFINGS IN BIOINFORMATICS

Role of pretreatment and conditioning processes on toxicity of lignocellulosic biomass hydrolysates

(2009) Philip T. Pienkos et al.   CELLULOSE

Hopanoids Play a Role in Membrane Integrity and pH Homeostasis in Rhodopseudomonas palustris TIE-1

(2009) P. V. Welander et al.   JOURNAL OF BACTERIOLOGY

Complete Genome Sequence of the Ethanol Producer Zymomonas mobilis NCIMB 11163

(2009) V. N. Kouvelis et al.   JOURNAL OF BACTERIOLOGY

Development of a high-throughput method to evaluate the impact of inhibitory compounds from lignocellulosic hydrolysates on the growth of Zymomonas mobilis

(2009) Mary Ann Franden et al.   JOURNAL OF BIOTECHNOLOGY

Improved genome annotation for Zymomonas mobilis

(2009) Shihui Yang et al.   NATURE BIOTECHNOLOGY

Engineering for biofuels: exploiting innate microbial capacity or importing biosynthetic potential?

(2009) Hal Alper et al.   NATURE REVIEWS MICROBIOLOGY

STRING 8--a global view on proteins and their functional interactions in 630 organisms

(2008) L. J. Jensen et al.   NUCLEIC ACIDS RESEARCH

Bacterial membrane proteomics

(2008) Ansgar Poetsch et al.   PROTEOMICS

Identification of furfural as a key toxin in lignocellulosic hydrolysates and evolution of a tolerant yeast strain

(2008) Dominik Heer et al.   Microbial Biotechnology