ChIP-Seq and RNA-Seq Reveal an AmrZ-Mediated Mechanism for Cyclic di-GMP Synthesis and Biofilm Development by Pseudomonas aeruginosa

A spider web strategy of type IV pili-mediated migration to build a fibre-like Psl polysaccharide matrix inPseudomonas aeruginosabiofilms

(2013) Shiwei Wang et al.   ENVIRONMENTAL MICROBIOLOGY

The Gac/Rsm and cyclic-di-GMP signalling networks coordinately regulate iron uptake inPseudomonas aeruginosa

(2013) Emanuela Frangipani et al.   ENVIRONMENTAL MICROBIOLOGY

Clearance of Pseudomonas aeruginosa Foreign-Body Biofilm Infections through Reduction of the Cyclic Di-GMP Level in the Bacteria

(2013) Louise D. Christensen et al.   INFECTION AND IMMUNITY

AmrZ Modulates Pseudomonas aeruginosa Biofilm Architecture by Directly Repressing Transcription of the psl Operon

(2013) C. J. Jones et al.   JOURNAL OF BACTERIOLOGY

The MerR-Like Regulator BrlR Confers Biofilm Tolerance by Activating Multidrug Efflux Pumps in Pseudomonas aeruginosa Biofilms

(2013) J. Liao et al.   JOURNAL OF BACTERIOLOGY

Cyclic di-GMP: the First 25 Years of a Universal Bacterial Second Messenger

(2013) U. Romling et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

The Mycobacterium tuberculosis regulatory network and hypoxia

(2013) James E. Galagan et al.   NATURE

Subcellular Clustering of the Phosphorylated WspR Response Regulator Protein Stimulates Its Diguanylate Cyclase Activity

(2013) V. Huangyutitham et al.   mBio

Second Messenger Regulation of Biofilm Formation: Breakthroughs in Understanding c-di-GMP Effector Systems

(2012) Chelsea D. Boyd et al.   Annual Review of Cell and Developmental Biology

You’ve come a long way: c-di-GMP signaling

(2012) Holger Sondermann et al.   CURRENT OPINION IN MICROBIOLOGY

Polysaccharides serve as scaffold of biofilms formed by mucoidPseudomonas aeruginosa

(2012) Liang Yang et al.   FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY

The Multiple Signaling Systems Regulating Virulence in Pseudomonas aeruginosa

(2012) P. Nadal Jimenez et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

ChIP-seq and transcriptome analysis of the OmpR regulon ofSalmonella entericaserovars Typhi and Typhimurium reveals accessory genes implicated in host colonization

(2012) Timothy T. Perkins et al.   MOLECULAR MICROBIOLOGY

The FleQ protein from Pseudomonas aeruginosa functions as both a repressor and an activator to control gene expression from the pel operon promoter in response to c-di-GMP

(2012) C. Baraquet et al.   NUCLEIC ACIDS RESEARCH

The Pseudomonas aeruginosa Transcriptome in Planktonic Cultures and Static Biofilms Using RNA Sequencing

(2012) Andreas Dötsch et al.   PLoS One

Self-produced exopolysaccharide is a signal that stimulates biofilm formation in Pseudomonas aeruginosa

(2012) Y. Irie et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Transcription Factor AmrZ Utilizes Multiple DNA Binding Modes to Recognize Activator and Repressor Sequences of Pseudomonas aeruginosa Virulence Genes

(2012) Edward E. Pryor et al.   PLoS Pathogens

Pseudomonas aeruginosa Psl polysaccharide reduces neutrophil phagocytosis and the oxidative response by limiting complement-mediated opsonization

(2011) Meenu Mishra et al.   CELLULAR MICROBIOLOGY

Distinct roles of extracellular polymeric substances in Pseudomonas aeruginosa biofilm development

(2011) Liang Yang et al.   ENVIRONMENTAL MICROBIOLOGY

The Pseudomonas aeruginosa sensor RetS switches Type III and Type VI secretion via c-di-GMP signalling

(2011) Joana A. Moscoso et al.   ENVIRONMENTAL MICROBIOLOGY

Direct Evaluation of Pseudomonas aeruginosa Biofilm Mediators in a Chronic Infection Model

(2011) Matthew S. Byrd et al.   INFECTION AND IMMUNITY

Type VI secretion delivers bacteriolytic effectors to target cells

(2011) Alistair B. Russell et al.   NATURE

Neutrophil Extracellular Trap (NET)-Mediated Killing of Pseudomonas aeruginosa: Evidence of Acquired Resistance within the CF Airway, Independent of CFTR

(2011) Robert L. Young et al.   PLoS One

Mapping the regulon of Vibrio cholerae ferric uptake regulator expands its known network of gene regulation

(2011) B. W. Davies et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Active Starvation Responses Mediate Antibiotic Tolerance in Biofilms and Nutrient-Limited Bacteria

(2011) D. Nguyen et al.   SCIENCE

A Type VI Secretion System of Pseudomonas aeruginosa Targets a Toxin to Bacteria

(2010) Rachel D. Hood et al.   Cell Host & Microbe

AmrZ Beta-Sheet Residues Are Essential for DNA Binding and Transcriptional Control of Pseudomonas aeruginosa Virulence Genes

(2010) E. A. Waligora et al.   JOURNAL OF BACTERIOLOGY

Pseudomonas aeruginosauses a cyclic-di-GMP-regulated adhesin to reinforce the biofilm extracellular matrix

(2010) Bradley R. Borlee et al.   MOLECULAR MICROBIOLOGY

Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes

(2010) G. L. Winsor et al.   NUCLEIC ACIDS RESEARCH

Cystic Fibrosis Pigs Develop Lung Disease and Exhibit Defective Bacterial Eradication at Birth

(2010) D. A. Stoltz et al.   Science Translational Medicine

The Pseudomonas aeruginosa Exopolysaccharide Psl Facilitates Surface Adherence and NF- B Activation in A549 Cells

(2010) M. S. Byrd et al.   mBio

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Direct interaction between sensor kinase proteins mediates acute and chronic disease phenotypes in a bacterial pathogen

(2009) A. L. Goodman et al.   GENES & DEVELOPMENT

Pseudomonas aeruginosa Rugose Small-Colony Variants Have Adaptations That Likely Promote Persistence in the Cystic Fibrosis Lung

(2009) M. Starkey et al.   JOURNAL OF BACTERIOLOGY

Quorum sensing differentially regulates Pseudomonas aeruginosa type VI secretion locus I and homologous loci II and III, which are required for pathogenesis

(2009) B. Lesic et al.   MICROBIOLOGY-SGM

Global position analysis of thePseudomonas aeruginosaquorum-sensing transcription factor LasR

(2009) Kerrigan B. Gilbert et al.   MOLECULAR MICROBIOLOGY

Protein structure prediction on the Web: a case study using the Phyre server

(2009) Lawrence A Kelley et al.   Nature Protocols

Principles of c-di-GMP signalling in bacteria

(2009) Regine Hengge   NATURE REVIEWS MICROBIOLOGY

Pseudomonas aeruginosa hypoxic or anaerobic biofilm infections within cystic fibrosis airways

(2009) Daniel J. Hassett et al.   TRENDS IN MICROBIOLOGY

PBAD-Based Shuttle Vectors for Functional Analysis of Toxic and Highly Regulated Genes in Pseudomonas and Burkholderia spp. and Other Bacteria

(2008) D. Qiu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Influence of Iron onPseudomonas aeruginosaPhysiology

(2008) Amanda G. Oglesby et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Identification of FleQ fromPseudomonas aeruginosaas a c-di-GMP-responsive transcription factor

(2008) Jason W. Hickman et al.   MOLECULAR MICROBIOLOGY

H-NS family members function coordinately in an opportunistic pathogen

(2008) S. Castang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

(2008) U. Nagalakshmi et al.   SCIENCE