Global transcriptome analysis identifies differentially expressed genes related to lipid metabolism in Wagyu and Holstein cattle

Identification and characterization of differentially expressed miRNAs in subcutaneous adipose between Wagyu and Holstein cattle

(2017) Yuntao Guo et al.   Scientific Reports

Transcriptional profiling of subcutaneous adipose tissue in Italian Large White pigs divergent for backfat thickness

(2016) P. Zambonelli et al.   ANIMAL GENETICS

Genome-wide transcriptome analysis in the ovaries of two goats identifies differentially expressed genes related to fecundity

(2016) Xiangyang Miao et al.   GENE

KEGG: new perspectives on genomes, pathways, diseases and drugs

(2016) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

How Muscle Structure and Composition Influence Meat and Flesh Quality

(2016) Anne Listrat et al.   TheScientificWorldJOURNAL

How Muscle Structure and Composition Influence Meat and Flesh Quality

(2016) Anne Listrat et al.   Scientific World Journal

Co-expression analysis and identification of fecundity-related long non-coding RNAs in sheep ovaries

(2016) Xiangyang Miao et al.   Scientific Reports

Genome-wide analysis of miRNAs in the ovaries of Jining Grey and Laiwu Black goats to explore the regulation of fecundity

(2016) Xiangyang Miao et al.   Scientific Reports

Ovarian transcriptomic study reveals the differential regulation of miRNAs and lncRNAs related to fecundity in different sheep

(2016) Xiangyang Miao et al.   Scientific Reports

Single Nucleotide Polymorphism in the Coding Region of Bovine Chemerin Gene and Their Associations with Carcass Traits in Japanese Black Cattle

(2015) Eri Yamauchi et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

Genome-wide mRNA-seq profiling reveals predominant down-regulation of lipid metabolic processes in adipose tissues of Small Tail Han than Dorset sheep

(2015) Xiangyang Miao et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Gelatinase A (MMP-2) promotes murine adipogenesis

(2015) Dries Bauters et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

Impacts of Alternative Splicing Events on the Differentiation of Adipocytes

(2015) Jung-Chun Lin   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Genome-wide transcriptome analysis of mRNAs and microRNAs in Dorset and Small Tail Han sheep to explore the regulation of fecundity

(2015) Xiangyang Miao et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

KEGG as a reference resource for gene and protein annotation

(2015) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

An alternative splicing event amplifies evolutionary differences between vertebrates

(2015) S. Gueroussov et al.   SCIENCE

Genome-wide analysis of microRNAs identifies the lipid metabolism pathway to be a defining factor in adipose tissue from different sheep

(2015) Xiangyang Miao et al.   Scientific Reports

Fat depot-specific differences in pref-1 gene expression and adipocyte cellularity between Wagyu and Holstein cattle

(2014) Tomoya Yamada et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Comparison of the adipogenesis in intramuscular and subcutaneous adipocytes from Bamei and Landrace pigs

(2014) Guo Hua Zhang et al.   Biochemistry and Cell Biology

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Fra-2/AP-1 controls adipocyte differentiation and survival by regulating PPARγ and hypoxia

(2014) J Luther et al.   CELL DEATH AND DIFFERENTIATION

SREBP-1c Gene Silencing can Decrease Lipid Deposits in Bovine Hepatocytes Cultured in Vitro

(2014) Qinghua Deng et al.   CELLULAR PHYSIOLOGY AND BIOCHEMISTRY

Transcriptome profile analysis of adipose tissues from fat and short-tailed sheep

(2014) Xiaolong Wang et al.   GENE

Function of SREBP1 in the Milk Fat Synthesis of Dairy Cow Mammary Epithelial Cells

(2014) Nan Li et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Comparative transcriptomic analysis to identify differentially expressed genes in fat tissue of adult Berkshire and Jeju Native Pig using RNA-seq

(2014) Simrinder Singh Sodhi et al.   MOLECULAR BIOLOGY REPORTS

RNA-seq analysis of bovine intramuscular, subcutaneous and perirenal adipose tissues

(2014) Xihui Sheng et al.   MOLECULAR BIOLOGY REPORTS

Adipocyte dysfunction, inflammation and metabolic syndrome

(2014) Nora Klöting et al.   REVIEWS IN ENDOCRINE & METABOLIC DISORDERS

Direct and indirect effects of leptin on adipocyte metabolism

(2013) Ruth B.S. Harris   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE

Fatty acid profiles and adipogenic gene expression of various fat depots in Japanese Black and Holstein steers

(2013) Bungo Shirouchi et al.   MEAT SCIENCE

Novel SNPs in the bovine ADIPOQ and PPARGC1A genes are associated with carcass traits in Hanwoo (Korean cattle)

(2013) Sungchul Shin et al.   MOLECULAR BIOLOGY REPORTS

Regulation of energy metabolism by long-chain fatty acids

(2013) Manabu T. Nakamura et al.   PROGRESS IN LIPID RESEARCH

Genome-wide transcriptome analysis between Small-tail Han sheep and the Surabaya fur sheep using high-throughput RNA sequencing

(2013) Xiangyang Miao et al.   REPRODUCTION

Identification of the SNP (Single Nucleotide Polymorphism) for Fatty Acid Composition Associated with Beef Flavor-related FABP4 (Fatty Acid Binding Protein 4) in Korean Cattle

(2012) Dong-yep Oh et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

CD36 promotes adipocyte differentiation and adipogenesis

(2012) Valerie Christiaens et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

Dual-specificity MAP kinase phosphatases (MKPs)

(2012) Christopher J. Caunt et al.   FEBS Journal

Identification of Candidate Genes related to Bovine Marbling using Protein-Protein Interaction Networks

(2012) Dajeong Lim et al.   International Journal of Biological Sciences

Genetic variation in fatty acid composition of subcutaneous fat in cattle

(2012) M. J. Kelly et al.   Animal Production Science

Egr-1 decreases adipocyte insulin sensitivity by tilting PI3K/Akt and MAPK signal balance in mice

(2011) Xiao Yu et al.   EMBO JOURNAL

Elevated Fra-1 expression causes severe lipodystrophy

(2011) J. Luther et al.   JOURNAL OF CELL SCIENCE

Cellular conditions for intramuscular fat deposition in Japanese Black and Holstein steers

(2011) E. Albrecht et al.   MEAT SCIENCE

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Effects of bovine fatty acid synthase, stearoyl-coenzyme A desaturase, sterol regulatory element-binding protein 1, and growth hormone gene polymorphisms on fatty acid composition and carcass traits in Japanese Black cattle1

(2010) T. Matsuhashi et al.   JOURNAL OF ANIMAL SCIENCE

Role of fatty acid elongases in determination of de novo synthesized monounsaturated fatty acid species

(2010) Christopher D. Green et al.   JOURNAL OF LIPID RESEARCH

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks

(2009) Gabriela Bindea et al.   BIOINFORMATICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Adipogenic and energy metabolism gene networks in longissimus lumborum during rapid post-weaning growth in Angus and Angus × Simmental cattle fed high-starch or low-starch diets

(2009) Daniel E Graugnard et al.   BMC GENOMICS

17β-Hydroxysteroid Dehydrogenase Type 12 in Human Breast Carcinoma: A Prognostic Factor via Potential Regulation of Fatty Acid Synthesis

(2009) Shuji Nagasaki et al.   CANCER RESEARCH

Allied Industry Approaches to Alter Intramuscular Fat Content and Composition in Beef Animals

(2009) Michael V. Dodson et al.   JOURNAL OF FOOD SCIENCE

Comparative analysis on gene expression profiles in cattle subcutaneous fat tissues

(2008) Masaaki Taniguchi et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Expression of adipogenic transcription factors in adipose tissue of fattening Wagyu and Holstein steers

(2008) T. Yamada et al.   MEAT SCIENCE

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS