Massive sequencing of Ulmus minor’s transcriptome provides new molecular tools for a genus under the constant threat of Dutch elm disease

Signaling events in plants: Stress factors in combination change the picture

(2015) Christian M. Prasch et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Genomics of the Dutch elm disease pathosystem: are we there yet?

(2015) L Bernier et al.   iForest-Biogeosciences and Forestry

Seven Ulmus minor clones tolerant to Ophiostoma novo-ulmi registered as forest reproductive material in Spain

(2015) JA Martín et al.   iForest-Biogeosciences and Forestry

Functional Annotation of the Ophiostoma novo-ulmi Genome: Insights into the Phytopathogenicity of the Fungal Agent of Dutch Elm Disease

(2014) André M. Comeau et al.   Genome Biology and Evolution

Population clustering and clonal structure evidence the relict state of Ulmus minor Mill. in the Balearic Islands

(2014) P Fuentes-Utrilla et al.   HEREDITY

First insights into the transcriptome and development of new genomic tools of a widespread circum-Mediterranean tree species,Pinus halepensisMill

(2014) S. Pinosio et al.   Molecular Ecology Resources

Abiotic and biotic stress combinations

(2014) Nobuhiro Suzuki et al.   NEW PHYTOLOGIST

Hybridization and introgression between the exotic Siberian elm, Ulmus pumila, and the native Field elm, U. minor, in Italy

(2013) Johanne Brunet et al.   BIOLOGICAL INVASIONS

Sequencing and annotation of the Ophiostoma ulmi genome

(2013) Shima Khoshraftar et al.   BMC GENOMICS

Extending glacial refugia for a European tree: genetic markers show that Iberian populations of white elm are native relicts and not introductions

(2013) P Fuentes-Utrilla et al.   HEREDITY

Jasmonate signaling in plant development and defense response to multiple (a)biotic stresses

(2013) Angelo Santino et al.   PLANT CELL REPORTS

Human-induced changes on fine-scale genetic structure in Ulmus laevis Pallas wetland forests at its SW distribution limit

(2013) Martin Venturas et al.   PLANT ECOLOGY

Heritability ofUlmus minorresistance to Dutch elm disease and its relationship to vessel size, but not to xylem vulnerability to drought

(2013) M. Venturas et al.   PLANT PATHOLOGY

Resistance to Dutch Elm Disease Reduces Presence of Xylem Endophytic Fungi in Elms (Ulmus spp.)

(2013) Juan A. Martín et al.   PLoS One

Draft genome sequence of the mulberry tree Morus notabilis

(2013) Ningjia He et al.   Nature Communications

Leaf trait dissimilarities between Dutch elm hybrids with a contrasting tolerance to Dutch elm disease

(2012) Jaroslav Ďurkovič et al.   ANNALS OF BOTANY

An elm EST database for identifying leaf beetle egg-induced defense genes

(2012) Kerstin Büchel et al.   BMC GENOMICS

Selective drought-induced decline of pine species in southeastern Spain

(2012) Raúl Sánchez-Salguero et al.   CLIMATIC CHANGE

High-Throughput SNP Discovery and Genotyping for Constructing a Saturated Linkage Map of Chickpea (Cicer arietinum L.)

(2012) R. Gaur et al.   DNA RESEARCH

Draft Genome Sequence of Daldinia eschscholzii Isolated from Blood Culture

(2012) Kee Peng Ng et al.   EUKARYOTIC CELL

Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

(2011) Emilie Chancerel et al.   BMC GENOMICS

‘Morfeo’ Elm: a new variety resistant to Dutch elm disease

(2011) A. Santini et al.   FOREST PATHOLOGY

Lignin metabolism has a central role in the resistance of cotton to the wilt fungus Verticillium dahliae as revealed by RNA-Seq-dependent transcriptional analysis and histochemistry

(2011) Li Xu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Forest tree genomics: growing resources and applications

(2011) David B. Neale et al.   NATURE REVIEWS GENETICS

The First Insight into the Tissue Specific Taxus Transcriptome via Illumina Second Generation Sequencing

(2011) Da Cheng Hao et al.   PLoS One

Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery

(2010) Thomas L Parchman et al.   BMC GENOMICS

Applications of next generation sequencing in molecular ecology of non-model organisms

(2010) R Ekblom et al.   HEREDITY

The genome of the domesticated apple (Malus × domestica Borkh.)

(2010) Riccardo Velasco et al.   NATURE GENETICS

Identification and monitoring of Ulmus americana transcripts during in vitro interactions with the Dutch elm disease pathogen Ophiostoma novo-ulmi

(2010) Mirella Aoun et al.   PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY

What can next generation sequencing do for you? Next generation sequencing as a valuable tool in plant research

(2010) A. Bräutigam et al.   PLANT BIOLOGY

Patterns of hybridization and introgression between invasive Ulmus pumila (Ulmaceae) and native U. rubra

(2009) J. E. Zalapa et al.   AMERICAN JOURNAL OF BOTANY

Comparison of next generation sequencing technologies for transcriptome characterization

(2009) P Kerr Wall et al.   BMC GENOMICS

Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx

(2009) Eli Meyer et al.   BMC GENOMICS

Bordered pit and ray morphology involvement in elm resistance to Ophiostoma novo-ulmi

(2009) Juan A. Martín et al.   CANADIAN JOURNAL OF FOREST RESEARCH

Fungal Colonization and Host Defense Reactions inUlmus americanaCallus Cultures Inoculated withOphiostoma novo-ulmi

(2009) Mirella Aoun et al.   PHYTOPATHOLOGY

Avoidance by early flushing: a new perspective on Dutch elm disease research

(2009) L Ghelardini et al.   iForest-Biogeosciences and Forestry

Enhancing genetic mapping of complex genomes through the design of highly-multiplexed SNP arrays: application to the large and unsequenced genomes of white spruce and black spruce

(2008) Nathalie Pavy et al.   BMC GENOMICS

High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome

(2008) Evandro Novaes et al.   BMC GENOMICS

Targeted gene analysis in Ulmus americana and U. pumila tissues

(2008) C. Nasmith et al.   FOREST PATHOLOGY

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

Isolation and characterization of microsatellite markers for red elm (Ulmus rubra Muhl.) and cross-species amplification with Siberian elm (Ulmus pumila L.)

(2007) J. E. ZALAPA et al.   Molecular Ecology Resources