Narrow-sense heritability and PST estimates of DNA methylation in three Populus nigra L. populations under contrasting water availability

Genetic and epigenetic variation in Spartina alterniflora following the Deepwater Horizon oil spill

(2017) Marta Robertson et al.   Evolutionary Applications

Changes in the epigenome and transcriptome of the poplar shoot apical meristem in response to water availability affect preferentially hormone pathways

(2017) Clément Lafon-Placette et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genomic Studies of Local Adaptation in Natural Plant Populations

(2017) Victoria L Sork   JOURNAL OF HEREDITY

Chilling-responsive DEMETER-LIKE DNA demethylase mediates in poplar bud break

(2017) Daniel Conde et al.   PLANT CELL AND ENVIRONMENT

In Silico Analysis of Small RNAs Suggest Roles for Novel and Conserved miRNAs in the Formation of Epigenetic Memory in Somatic Embryos of Norway Spruce

(2017) Igor A. Yakovlev et al.   Frontiers in Physiology

Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions

(2016) Taiji Kawakatsu et al.   CELL

Plasticity of yield and nitrogen removal in 56 Populus deltoides×P. nigra genotypes over two rotations of short-rotation coppice

(2016) Julien Toillon et al.   FOREST ECOLOGY AND MANAGEMENT

Epigenetics in ecology and evolution: what we know and what we need to know

(2016) Koen J. F. Verhoeven et al.   MOLECULAR ECOLOGY

New resources for genetic studies inPopulus nigra: genome-wide SNP discovery and development of a 12k Infinium array

(2016) P. Faivre-Rampant et al.   Molecular Ecology Resources

Transcriptional profiling of epigenetic regulators in somatic embryos during temperature induced formation of an epigenetic memory in Norway spruce

(2016) Igor A. Yakovlev et al.   PLANTA

Site-Dependent Differences in DNA Methylation and Their Impact on Plant Establishment and Phosphorus Nutrition in Populus trichocarpa

(2016) Brigitte Schönberger et al.   PLoS One

Profiling genome-wide DNA methylation

(2016) Wai-Shin Yong et al.   Epigenetics & Chromatin

Stress Memory and the Inevitable Effects of Drought: A Physiological Perspective

(2016) Eva Fleta-Soriano et al.   Frontiers in Plant Science

Genome-Assisted Prediction of Quantitative Traits Using the R Package sommer

(2016) Giovanny Covarrubias-Pazaran   PLoS One

Forest tree genomics: 10 achievements from the past 10 years and future prospects

(2015) Christophe Plomion et al.   ANNALS OF FOREST SCIENCE

Epigenetic variation and environmental change: Fig. 1.

(2015) Peter Meyer   JOURNAL OF EXPERIMENTAL BOTANY

Stable methylation of a non-coding RNA gene regulates gene expression in response to abiotic stress inPopulus simonii

(2015) Yuepeng Song et al.   JOURNAL OF EXPERIMENTAL BOTANY

MSAP markers and global cytosine methylation in plants: a literature survey and comparative analysis for a wild-growing species

(2015) Conchita Alonso et al.   Molecular Ecology Resources

Epigenetic Basis of Morphological Variation and Phenotypic Plasticity inArabidopsis thaliana

(2015) Rik Kooke et al.   PLANT CELL

Vulnerability to drought-induced cavitation in poplars: synthesis and future opportunities

(2015) RÉGIS FICHOT et al.   PLANT CELL AND ENVIRONMENT

Global DNA cytosine methylation as an evolving trait: phylogenetic signal and correlated evolution with genome size in angiosperms

(2015) Conchita Alonso et al.   Frontiers in Genetics

Epigenetic Diversity of Clonal White Poplar (Populus alba L.) Populations: Could Methylation Support the Success of Vegetative Reproduction Strategy?

(2015) Francesco Guarino et al.   PLoS One

Divergent DNA methylation patterns associated with gene expression in rice cultivars with contrasting drought and salinity stress response

(2015) Rohini Garg et al.   Scientific Reports

Single-base-resolution methylomes of populus trichocarpa reveal the association between DNA methylation and drought stress

(2014) Dan Liang et al.   BMC GENETICS

Phenotypic plasticity toward water regime: response of leaf growth and underlying candidate genes inPopulus

(2014) François Bizet et al.   PHYSIOLOGIA PLANTARUM

Mapping the Epigenetic Basis of Complex Traits

(2014) S. Cortijo et al.   SCIENCE

Natural CMT2 Variation Is Associated With Genome-Wide Methylation Changes and Temperature Seasonality

(2014) Xia Shen et al.   PLoS Genetics

Patterns of population epigenomic diversity

(2013) Robert J. Schmitz et al.   NATURE

In search of markers for somatic embryo maturation in hybrid larch (Larix×eurolepis): global DNA methylation and proteomic analyses

(2013) Caroline Teyssier et al.   PHYSIOLOGIA PLANTARUM

Poplars with a PtDDM1-RNAi transgene have reduced DNA methylation and show aberrant post-dormancy morphology

(2013) Ruoqing Zhu et al.   PLANTA

Epigenetic diversity increases the productivity and stability of plant populations

(2013) Vít Latzel et al.   Nature Communications

Epigenetic regulation of adaptive responses of forest tree species to the environment

(2013) Katharina Bräutigam et al.   Ecology and Evolution

Improved Heritability Estimation from Genome-wide SNPs

(2012) Doug Speed et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression

(2012) Kelly J Vining et al.   BMC GENOMICS

Drought induces alterations in the stomatal development program in Populus

(2012) Erin T Hamanishi et al.   JOURNAL OF EXPERIMENTAL BOTANY

Epigenetics and the environment: emerging patterns and implications

(2012) Robert Feil et al.   NATURE REVIEWS GENETICS

Methylome of DNase I sensitive chromatin inPopulus trichocarpashoot apical meristematic cells: a simplified approach revealing characteristics of gene-body DNA methylation in open chromatin state

(2012) Clément Lafon-Placette et al.   NEW PHYTOLOGIST

Multiple exposures to drought 'train' transcriptional responses in Arabidopsis

(2012) Yong Ding et al.   Nature Communications

Epigenetic contribution to stress adaptation in plants

(2011) Marie Mirouze et al.   CURRENT OPINION IN PLANT BIOLOGY

Time course and amplitude of DNA methylation in the shoot apical meristem are critical points for bolting induction in sugar beet and bolting tolerance between genotypes

(2011) Marie-Véronique Trap-Gentil et al.   JOURNAL OF EXPERIMENTAL BOTANY

Clone history shapes Populus drought responses

(2011) S. Raj et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Variations in bulk leaf carbon isotope discrimination, growth and related leaf traits among three Populus nigra L. populations

(2011) S. Chamaillard et al.   TREE PHYSIOLOGY

DNA methylation and histone acetylation: genotypic variations in hybrid poplars, impact of water deficit and relationships with productivity

(2010) Delphine Gourcilleau et al.   ANNALS OF FOREST SCIENCE

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

(2010) Julie A. Law et al.   NATURE REVIEWS GENETICS

MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce

(2010) Igor A. Yakovlev et al.   NEW PHYTOLOGIST

Differential gene expression related to an epigenetic memory affecting climatic adaptation in Norway spruce

(2010) Igor A. Yakovlev et al.   PLANT SCIENCE

Plant phenotypic plasticity in a changing climate

(2010) A.B. Nicotra et al.   TRENDS IN PLANT SCIENCE

Contrasting patterns of transgenerational plasticity in ecologically distinct congeners

(2009) Sonia E. Sultan et al.   ECOLOGY

A global overview of drought and heat-induced tree mortality reveals emerging climate change risks for forests

(2009) Craig D. Allen et al.   FOREST ECOLOGY AND MANAGEMENT

Adaptation to an extraordinary environment by evolution of phenotypic plasticity and genetic assimilation

(2009) R. LANDE   JOURNAL OF EVOLUTIONARY BIOLOGY

Geographic patterns of genetic differentiation and plumage colour variation are different in the pied flycatcher (Ficedula hypoleuca)

(2009) PAULA K. LEHTONEN et al.   MOLECULAR ECOLOGY

Personal genomes: The case of the missing heritability

(2008) Brendan Maher   NATURE

Tissue dependent variations of DNA methylation and endoreduplication levels during tomato fruit development and ripening

(2008) E. Teyssier et al.   PLANTA