Reprogramming of Yersinia from Virulent to Persistent Mode Revealed by Complex In Vivo RNA-seq Analysis

Colonization of Cecum Is Important for Development of Persistent Infection by Yersinia pseudotuberculosis

(2014) Anna Fahlgren et al.   INFECTION AND IMMUNITY

A direct link between the global regulator PhoP and the Csr regulon inY. pseudotuberculosisthrough the small regulatory RNA CsrC

(2014) Aaron M Nuss et al.   RNA Biology

Innate and Adaptive Immunity Interact to Quench Microbiome Flagellar Motility in the Gut

(2013) Tyler C. Cullender et al.   Cell Host & Microbe

Microbial Persistence and the Road to Drug Resistance

(2013) Nadia R. Cohen et al.   Cell Host & Microbe

Yersinia pseudotuberculosis Efficiently Escapes Polymorphonuclear Neutrophils during Early Infection

(2013) Linda Westermark et al.   INFECTION AND IMMUNITY

The Complete Campylobacter jejuni Transcriptome during Colonization of a Natural Host Determined by RNAseq

(2013) Michael E. Taveirne et al.   PLoS One

Helicobacter and Salmonella Persistent Infection Strategies

(2013) D. M. Monack   Cold Spring Harbor Perspectives in Medicine

Accuracy of RNA-Seq and its dependence on sequencing depth

(2012) Guoshuai Cai et al.   BMC BIOINFORMATICS

Dual RNA-seq of pathogen and host

(2012) Alexander J. Westermann et al.   NATURE REVIEWS MICROBIOLOGY

Autoproteolysis and Intramolecular Dissociation of Yersinia YscU Precedes Secretion of Its C-Terminal Polypeptide YscUCC

(2012) Stefan Frost et al.   PLoS One

Inferring Correlation Networks from Genomic Survey Data

(2012) Jonathan Friedman et al.   PLoS Computational Biology

Crp Induces Switching of the CsrB and CsrC RNAs in Yersinia pseudotuberculosis and Links Nutritional Status to Virulence

(2012) Ann Kathrin Heroven et al.   Frontiers in Cellular and Infection Microbiology

Analysis of the ArcA regulon in anaerobically grown Salmonella enterica sv. Typhimurium

(2011) Matthew R Evans et al.   BMC MICROBIOLOGY

RNA-Seq-Based Monitoring of Infection-Linked Changes in Vibrio cholerae Gene Expression

(2011) Anjali Mandlik et al.   Cell Host & Microbe

Salmonella persistence and transmission strategies

(2011) Denise M Monack   CURRENT OPINION IN MICROBIOLOGY

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Large Scale Library Generation for High Throughput Sequencing

(2011) Erik Borgström et al.   PLoS One

The presence of professional phagocytes dictates the number of host cells targeted for Yop translocation during infection

(2010) Enrique A. Durand et al.   CELLULAR MICROBIOLOGY

Occurrence of pathogenic Yersinia enterocolitica and Yersinia pseudotuberculosis in small wild rodents

(2010) A. BACKHANS et al.   EPIDEMIOLOGY AND INFECTION

Global Gene Expression Profiling of Yersinia pestis Replicating inside Macrophages Reveals the Roles of a Putative Stress-Induced Operon in Regulating Type III Secretion and Intracellular Cell Division

(2010) H. S. Fukuto et al.   INFECTION AND IMMUNITY

Modulation of Shigella virulence in response to available oxygen in vivo

(2010) Benoit Marteyn et al.   NATURE

Metabolic Syndrome and Altered Gut Microbiota in Mice Lacking Toll-Like Receptor 5

(2010) M. Vijay-Kumar et al.   SCIENCE

Burkholderia Type VI Secretion Systems Have Distinct Roles in Eukaryotic and Bacterial Cell Interactions

(2010) Sandra Schwarz et al.   PLoS Pathogens

Monovalent and unpoised status of most genes in undifferentiated cell-enriched Drosophila testis

(2010) Qiang Gan et al.   GENOME BIOLOGY

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Phenotypic analysis of Yersinia pseudotuberculosis 32777 response regulator mutants: New insights into two-component system regulon plasticity in bacteria

(2007) Claire Flamez et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY