Identification of candidate genes for prostate cancer-risk SNPs utilizing a normal prostate tissue eQTL data set
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Title
Identification of candidate genes for prostate cancer-risk SNPs utilizing a normal prostate tissue eQTL data set
Authors
Keywords
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Journal
Nature Communications
Volume 6, Issue 1, Pages -
Publisher
Springer Nature
Online
2015-11-27
DOI
10.1038/ncomms9653
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Note: Only part of the references are listed.- Comprehensively Evaluating cis -Regulatory Variation in the Human Prostate Transcriptome by Using Gene-Level Allele-Specific Expression
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- (2015) Christopher C Chang et al. GigaScience
- HTSeq--a Python framework to work with high-throughput sequencing data
- (2014) S. Anders et al. BIOINFORMATICS
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- (2014) Krishna R Kalari et al. BMC BIOINFORMATICS
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- (2014) K.-i. Takayama et al. CANCER RESEARCH
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- (2013) Tuuli Lappalainen et al. NATURE
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- (2013) John Lonsdale et al. NATURE GENETICS
- The NHGRI GWAS Catalog, a curated resource of SNP-trait associations
- (2013) Danielle Welter et al. NUCLEIC ACIDS RESEARCH
- Matrix eQTL: ultra fast eQTL analysis via large matrix operations
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- (2008) D. F. Easton et al. HUMAN MOLECULAR GENETICS
- Multiple loci identified in a genome-wide association study of prostate cancer
- (2008) Gilles Thomas et al. NATURE GENETICS
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