Assessing genetic architecture and signatures of selection of dual purpose Gir cattle populations using genomic information

Assessment of runs of homozygosity islands and estimates of genomic inbreeding in Gyr (Bos indicus) dairy cattle

(2018) Elisa Peripolli et al.   BMC GENOMICS

Genome-wide association and pathway-based analysis using latent variables related to milk protein composition and cheesemaking traits in dairy cattle

(2017) Christos Dadousis et al.   JOURNAL OF DAIRY SCIENCE

Pathway-based genome-wide association analysis of milk coagulation properties, curd firmness, cheese yield, and curd nutrient recovery in dairy cattle

(2017) C. Dadousis et al.   JOURNAL OF DAIRY SCIENCE

Genetic basis of Lipomatous Myopathy in Piedmontese beef cattle

(2017) S. Peletto et al.   Livestock Science

An Evolutionary Genomic Perspective on the Breeding of Dwarf Chickens

(2017) Ming-Shan Wang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome-wide association studies for reproductive seasonality traits in Rasa Aragonesa sheep breed

(2017) Albert Martinez-Royo et al.   THERIOGENOLOGY

Signatures of Selection for Environmental Adaptation and Zebu × Taurine Hybrid Fitness in East African Shorthorn Zebu

(2017) Hussain Bahbahani et al.   Frontiers in Genetics

Global transcriptome analysis identifies differentially expressed genes related to lipid metabolism in Wagyu and Holstein cattle

(2017) Wanlong Huang et al.   Scientific Reports

Genetic diversity and genomic signatures of selection among cattle breeds from Siberia, eastern and northern Europe

(2016) T. Iso-Touru et al.   ANIMAL GENETICS

Genome-wide association for milk production and female fertility traits in Canadian dairy Holstein cattle

(2016) Shadi Nayeri et al.   BMC GENETICS

Transcriptome profiling of the rumen epithelium of beef cattle differing in residual feed intake

(2016) Rebecca S. G. Kong et al.   BMC GENOMICS

Using gene networks to identify genes and pathways involved in milk production traits in Polish Holstein dairy cattle

(2016) T. Suchocki et al.   CZECH JOURNAL OF ANIMAL SCIENCE

Genetic origin, admixture and population history of aurochs (Bos primigenius) and primitive European cattle

(2016) M R Upadhyay et al.   HEREDITY

Regulation, Signaling, and Physiological Functions of G-Proteins

(2016) Viktoriya Syrovatkina et al.   JOURNAL OF MOLECULAR BIOLOGY

rehh2.0: a reimplementation of the R packagerehhto detect positive selection from haplotype structure

(2016) Mathieu Gautier et al.   Molecular Ecology Resources

Population genomics identifies the origin and signatures of selection of Korean weedy rice

(2016) Qiang He et al.   PLANT BIOTECHNOLOGY JOURNAL

Selection signatures in Canchim beef cattle

(2016) Ismael Urbinati et al.   Journal of Animal Science and Biotechnology

ADAMTS3 activity is mandatory for embryonic lymphangiogenesis and regulates placental angiogenesis

(2015) Lauriane Janssen et al.   ANGIOGENESIS

The Prediction of the Expected Current Selection Coefficient of Single Nucleotide Polymorphism Associated with Holstein Milk Yield, Fat and Protein Contents

(2015) Young-Sup Lee et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

Genomic population structure and prevalence of copy number variations in South African Nguni cattle

(2015) Magretha Diane Wang et al.   BMC GENOMICS

Genome-wide insights into population structure and genetic history of tunisian local cattle using the illumina bovinesnp50 beadchip

(2015) Slim Ben Jemaa et al.   BMC GENOMICS

Detection of Selection Signatures on the X Chromosome in Three Sheep Breeds

(2015) Caiye Zhu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

F-BAR family proteins, emerging regulators for cell membrane dynamic changes—from structure to human diseases

(2015) Suxuan Liu et al.   Journal of Hematology & Oncology

Network Analysis for the Identification of Differentially Expressed Hub Genes Using Myogenin Knock-down Muscle Satellite Cells

(2015) Adeel Malik et al.   PLoS One

Identification of the putative ancestral allele of bovine single-nucleotide polymorphisms

(2014) D. Rocha et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Wnt7a stimulates myogenic stem cell motility and engraftment resulting in improved muscle strength

(2014) C. Florian Bentzinger et al.   JOURNAL OF CELL BIOLOGY

A genome-wide association study of calf birth weight in Holstein cattle using single nucleotide polymorphisms and phenotypes predicted from auxiliary traits

(2014) J.B. Cole et al.   JOURNAL OF DAIRY SCIENCE

History, structure, and genetic diversity of Brazilian Gir cattle

(2014) M.L. Santana et al.   Livestock Science

Identification of Selection Footprints on the X Chromosome in Pig

(2014) Yunlong Ma et al.   PLoS One

Comparison of Metabolic Network between Muscle and Intramuscular Adipose Tissues in Hanwoo Beef Cattle Using a Systems Biology Approach

(2014) Hyun-Jeong Lee et al.   International Journal of Genomics

A bioinformatics workflow for detecting signatures of selection in genomic data

(2014) Murray Cadzow et al.   Frontiers in Genetics

Use of locally weighted scatterplot smoothing (LOWESS) regression to study selection signatures in Piedmontese and Italian Brown cattle breeds

(2013) Elia Pintus et al.   ANIMAL GENETICS

Haplotypes and effects on growth traits of bovine Wnt7a gene in Chinese Qinchuan cattle

(2013) Jing Xue et al.   GENE

Whole genome sequencing of Gir cattle for identifying polymorphisms and loci under selection

(2013) Xiaoping Liao et al.   GENOME

The Role of Tight Junctions in Mammary Gland Function

(2013) Kerst Stelwagen et al.   JOURNAL OF MAMMARY GLAND BIOLOGY AND NEOPLASIA

Detecting Loci under Recent Positive Selection in Dairy and Beef Cattle by Combining Different Genome-Wide Scan Methods

(2013) Yuri Tani Utsunomiya et al.   PLoS One

Dual-Specificity Phosphatase 10 Controls Brown Adipocyte Differentiation by Modulating the Phosphorylation of P38 Mitogen-Activated Protein Kinase

(2013) Hye-Ryung Choi et al.   PLoS One

Genome-wide associations for feed utilisation complex in primiparous Holstein–Friesian dairy cows from experimental research herds in four European countries

(2012) R. F. Veerkamp et al.   Animal

Transcriptional Response of Peripheral Blood Mononuclear Cells from Cattle Infected with Mycobacterium bovis

(2012) Federico Carlos Blanco et al.   PLoS One

Genome-Wide Analysis of the World's Sheep Breeds Reveals High Levels of Historic Mixture and Strong Recent Selection

(2012) James W. Kijas et al.   PLOS BIOLOGY

The SNP c.1326T>G in the non-SMC condensin I complex, subunit G (NCAPG) gene encoding a p.Ile442Met variant is associated with an increase in body frame size at puberty in cattle

(2011) K. Setoguchi et al.   ANIMAL GENETICS

Association, effects and validation of polymorphisms within the NCAPG - LCORL locus located on BTA6 with feed intake, gain, meat and carcass traits in beef cattle

(2011) Amanda K Lindholm-Perry et al.   BMC GENETICS

Application of site and haplotype-frequency based approaches for detecting selection signatures in cattle

(2011) Saber Qanbari et al.   BMC GENOMICS

A novel role for neural cell adhesion molecule in modulating insulin signaling and adipocyte differentiation of mouse mesenchymal stem cells

(2011) H. J. Yang et al.   JOURNAL OF CELL SCIENCE

Footprints of selection in the ancestral admixture of a New World Creole cattle breed

(2011) MATHIEU GAUTIER et al.   MOLECULAR ECOLOGY

Role of SPI-1 Secreted Effectors in Acute Bovine Response to Salmonella enterica Serovar Typhimurium: A Systems Biology Analysis Approach

(2011) Sara D. Lawhon et al.   PLoS One

Genetic and expression analysis of cattle identifies candidate genes in pathways responding to Trypanosoma congolense infection

(2011) H. Noyes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

Identification of NEEP21 as a  -Amyloid Precursor Protein-Interacting Protein In Vivo That Modulates Amyloidogenic Processing In Vitro

(2010) E. M. Norstrom et al.   JOURNAL OF NEUROSCIENCE

Screening candidate genes related to tenderness trait in Qinchuan cattle by genome array

(2010) YingYing Zhang et al.   MOLECULAR BIOLOGY REPORTS

Wnt7a Activates the Planar Cell Polarity Pathway to Drive the Symmetric Expansion of Satellite Stem Cells

(2009) Fabien Le Grand et al.   Cell Stem Cell

Genetic markers in the playground of multivariate analysis

(2009) T Jombart et al.   HEREDITY

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

A unified approach to false discovery rate estimation

(2008) Korbinian Strimmer   BMC BIOINFORMATICS

The somatodendritic endosomal regulator NEEP21 facilitates axonal targeting of L1/NgCAM

(2008) Chan Choo Yap et al.   JOURNAL OF CELL BIOLOGY

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH

A Genome-Wide Association Study Identifies Novel Alleles Associated with Hair Color and Skin Pigmentation

(2008) Jiali Han et al.   PLoS Genetics