Transcriptomic analysis of the response of Pseudomonas fluorescens to epigallocatechin gallate by RNA-seq
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Title
Transcriptomic analysis of the response of Pseudomonas fluorescens to epigallocatechin gallate by RNA-seq
Authors
Keywords
Pseudomonas fluorescens, Gene expression, Histidine, Regulator genes, Biosynthesis, DNA repair, RNA sequencing, Tea
Journal
PLoS One
Volume 12, Issue 5, Pages e0177938
Publisher
Public Library of Science (PLoS)
Online
2017-05-19
DOI
10.1371/journal.pone.0177938
References
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- (2015) Junli Zhu et al. JOURNAL OF MICROBIOLOGY
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- (2015) Jürg Dreier et al. Frontiers in Microbiology
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- (2014) E. N. H. Tran et al. MICROBIOLOGY-SGM
- Transcriptomic Analysis of (Group I) Clostridium botulinum ATCC 3502 Cold Shock Response
- (2014) Elias Dahlsten et al. PLoS One
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- Epigallocatechin Gallate Induces Upregulation of the Two-Component VraSR System by Evoking a Cell Wall Stress Response in Staphylococcus aureus
- (2012) Oren Levinger et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Green tea polyphenols function as prooxidants to inhibit Pseudomonas aeruginosa and induce the expression of oxidative stress-related genes
- (2012) Xiaoxiang Liu et al. FOLIA MICROBIOLOGICA
- The Effect of Iron Limitation on the Transcriptome and Proteome of Pseudomonas fluorescens Pf-5
- (2012) Chee Kent Lim et al. PLoS One
- Exposure of Pseudomonas aeruginosa to green tea polyphenols enhances the tolerance to various environmental stresses
- (2012) Xiaoxiang Liu et al. WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY
- Genome-wide dynamics of a bacterial response to antibiotics that target the cell envelope
- (2011) Andy Hesketh et al. BMC GENOMICS
- AFM study of the differential inhibitory effects of the green tea polyphenol (−)-epigallocatechin-3-gallate (EGCG) against Gram-positive and Gram-negative bacteria
- (2011) Y. Cui et al. FOOD MICROBIOLOGY
- Isolation of Green Tea Catechins and Their Utilization in the Food Industry
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- Characterization of the Induction and Cellular Role of the BaeSR Two-Component Envelope Stress Response of Escherichia coli
- (2011) S. K. D. Leblanc et al. JOURNAL OF BACTERIOLOGY
- Effect of tea polyphenols on microbiological and biochemical quality of Collichthys fish ball
- (2011) Shumin Yi et al. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE
- Iron uptake and metabolism in pseudomonads
- (2010) Pierre Cornelis APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Escherichia coli genes that reduce the lethal effects of stress
- (2010) Xiulin Han et al. BMC MICROBIOLOGY
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- Tea polyphenols inhibit Pseudomonas aeruginosa through damage to the cell membrane
- (2010) Shu-min Yi et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
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- (2010) Cole Trapnell et al. NATURE BIOTECHNOLOGY
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- DEGseq: an R package for identifying differentially expressed genes from RNA-seq data
- (2009) Likun Wang et al. BIOINFORMATICS
- TopHat: discovering splice junctions with RNA-Seq
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- (2009) M. D. Robinson et al. BIOINFORMATICS
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- (2007) Wenjiao Fan et al. FOOD CHEMISTRY
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