Growth-altering microbial interactions are responsive to chemical context

Inference of Network Dynamics and Metabolic Interactions in the Gut Microbiome

(2015) Steven N. Steinway et al.   PLoS Computational Biology

Localization of Burkholderia cepacia Complex Bacteria in Cystic Fibrosis Lungs and Interactions with Pseudomonas aeruginosa in Hypoxic Mucus

(2014) Ute Schwab et al.   INFECTION AND IMMUNITY

Staphylococcus aureus Alters Growth Activity, Autolysis, and Antibiotic Tolerance in a Human Host-Adapted Pseudomonas aeruginosa Lineage

(2014) C. F. Michelsen et al.   JOURNAL OF BACTERIOLOGY

Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile

(2014) Charlie G. Buffie et al.   NATURE

Metabolic Resource Allocation in Individual Microbes Determines Ecosystem Interactions and Spatial Dynamics

(2014) William R. Harcombe et al.   Cell Reports

Mechanisms and Biological Roles of Contact-Dependent Growth Inhibition Systems

(2014) C. S. Hayes et al.   Cold Spring Harbor Perspectives in Medicine

Volatile-mediated interactions between phylogenetically different soil bacteria

(2014) Paolina Garbeva et al.   Frontiers in Microbiology

Xenobiotics Shape the Physiology and Gene Expression of the Active Human Gut Microbiome

(2013) Corinne Ferrier Maurice et al.   CELL

Microbial Geography of the Oral Cavity

(2013) Á. Simón-Soro et al.   JOURNAL OF DENTAL RESEARCH

Interspecies Interaction between Pseudomonas aeruginosa and Other Microorganisms

(2013) Yosuke Tashiro et al.   MICROBES AND ENVIRONMENTS

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

Going back to the roots: the microbial ecology of the rhizosphere

(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Context-Dependent Competition in a Model Gut Bacterial Community

(2013) Eric J. de Muinck et al.   PLoS One

Mathematical modeling of primary succession of murine intestinal microbiota

(2013) S. Marino et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interspecies Interactions Stimulate Diversification of the Streptomyces coelicolor Secreted Metabolome

(2013) M. F. Traxler et al.   mBio

Ecological Modeling from Time-Series Inference: Insight into Dynamics and Stability of Intestinal Microbiota

(2013) Richard R. Stein et al.   PLoS Computational Biology

Fungal community on decomposing leaf litter undergoes rapid successional changes

(2012) Jana Voříšková et al.   ISME Journal

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

Species Interactions Alter Evolutionary Responses to a Novel Environment

(2012) Diane Lawrence et al.   PLOS BIOLOGY

Imaging and Analysis of Pseudomonas aeruginosa Swarming and Rhamnolipid Production

(2011) Joshua D. Morris et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Analysis of the Lung Microbiome in the “Healthy” Smoker and in COPD

(2011) John R. Erb-Downward et al.   PLoS One

Environments that Induce Synthetic Microbial Ecosystems

(2010) Niels Klitgord et al.   PLoS Computational Biology

Bacterial competition: surviving and thriving in the microbial jungle

(2009) Michael E. Hibbing et al.   NATURE REVIEWS MICROBIOLOGY