Reprogramming of Strawberry (Fragaria vesca) Root Transcriptome in Response to Phytophthora cactorum

Ontogenetic variation of catechin biosynthesis as basis for infection and quiescence of Botrytis cinerea in developing strawberry fruits

(2016) I. Puhl et al.   Journal of Plant Diseases and Protection

PANNZER: high-throughput functional annotation of uncharacterized proteins in an error-prone environment

(2015) Patrik Koskinen et al.   BIOINFORMATICS

L-type lectin receptor kinases inNicotiana benthamianaand tomato and their role inPhytophthoraresistance

(2015) Yan Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Mapping of the RPc-1 locus for Phytophthora cactorum resistance in Fragaria vesca

(2015) Jahn Davik et al.   MOLECULAR BREEDING

Trade-off between growth and immunity: role of brassinosteroids

(2015) Rosa Lozano-Durán et al.   TRENDS IN PLANT SCIENCE

Large-Scale Phenomics Identifies Primary and Fine-Tuning Roles for CRKs in Responses Related to Oxidative Stress

(2015) Gildas Bourdais et al.   PLoS Genetics

How salicylic acid takes transcriptional control over jasmonic acid signaling

(2015) Lotte Caarls et al.   Frontiers in Plant Science

Triterpene Biosynthesis in Plants

(2014) Ramesha Thimmappa et al.   Annual Review of Plant Biology

S-locus receptor kinase signalling

(2014) June B. Nasrallah et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Suppression of the auxin response pathway enhances susceptibility to Phytophthora cinnamomi while phosphite-mediated resistance stimulates the auxin signalling pathway

(2014) Leila Eshraghi et al.   BMC PLANT BIOLOGY

Cleavage of the SYMBIOSIS RECEPTOR-LIKE KINASE Ectodomain Promotes Complex Formation with Nod Factor Receptor 5

(2014) Meritxell Antolín-Llovera et al.   CURRENT BIOLOGY

Polyphenols in Strawberry (Fragaria × ananassa) Leaves Induced by Plant Activators

(2014) Anna Kårlund et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Growth–Defense Tradeoffs in Plants: A Balancing Act to Optimize Fitness

(2014) Bethany Huot et al.   Molecular Plant

Phenotypic Analyses ofArabidopsisT-DNA Insertion Lines and Expression Profiling Reveal That Multiple L-Type Lectin Receptor Kinases Are Involved in Plant Immunity

(2014) Yan Wang et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Cell Wall-Related Proteins of Unknown Function: Missing Links in Plant Cell Wall Development

(2014) Ritesh Mewalal et al.   PLANT AND CELL PHYSIOLOGY

Arabidopsis NAC Domain Proteins, VND1 to VND5, Are Transcriptional Regulators of Secondary Wall Biosynthesis in Vessels

(2014) Jianli Zhou et al.   PLoS One

Plant pattern-recognition receptors

(2014) Cyril Zipfel   TRENDS IN IMMUNOLOGY

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

Ethylene signaling: simple ligand, complex regulation

(2013) Catharina Merchante et al.   CURRENT OPINION IN PLANT BIOLOGY

The Strawberry Pathogenesis-related 10 (PR-10) Fra a Proteins Control Flavonoid Biosynthesis by Binding to Metabolic Intermediates

(2013) Ana Casañal et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Auxin Biosynthesis by theYUCCA6Flavin Monooxygenase Gene in Woodland Strawberry

(2013) Hong Liu et al.   Journal of Integrative Plant Biology

Comparative Proteome Analysis of the Strawberry-Fusarium oxysporum f. sp. fragariae Pathosystem Reveals Early Activation of Defense Responses as a Crucial Determinant of Host Resistance

(2013) Xiangling Fang et al.   JOURNAL OF PROTEOME RESEARCH

Pathogenesis related-10 proteins are small, structurally similar but with diverse role in stress signaling

(2013) Parinita Agarwal et al.   MOLECULAR BIOLOGY REPORTS

Characterization of two PR genes from Fragaria chiloensis in response to Botrytis cinerea infection: A comparison with Fragaria x ananassa

(2013) Gloria González et al.   PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY

Auxin promotes susceptibility toPseudomonas syringaevia a mechanism independent of suppression of salicylic acid-mediated defenses

(2013) Andrew M. Mutka et al.   PLANT JOURNAL

Arabidopsis WAT1 is a vacuolar auxin transport facilitator required for auxin homoeostasis

(2013) Philippe Ranocha et al.   Nature Communications

Long-distance communication and signal amplification in systemic acquired resistance

(2013) Jyoti Shah et al.   Frontiers in Plant Science

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Identity and potential pathogenicity ofPhytophthoraspecies found on symptomaticRhododendronplants in a Finnish nursery

(2012) A. Rytkönen et al.   CANADIAN JOURNAL OF PLANT PATHOLOGY

Structure and Dynamics of the Isoprenoid Pathway Network

(2012) Eva Vranová et al.   Molecular Plant

Arabidopsiswat1(walls are thin1)-mediated resistance to the bacterial vascular pathogen,Ralstonia solanacearum, is accompanied by cross-regulation of salicylic acid and tryptophan metabolism

(2012) Nicolas Denancé et al.   PLANT JOURNAL

Brassinosteroids Antagonize Gibberellin- and Salicylate-Mediated Root Immunity in Rice

(2012) D. De Vleesschauwer et al.   PLANT PHYSIOLOGY

Hormone Crosstalk in Plant Disease and Defense: More Than Just JASMONATE-SALICYLATE Antagonism

(2011) Alexandre Robert-Seilaniantz et al.   Annual Review of Phytopathology

SND2, a NAC transcription factor gene, regulates genes involved in secondary cell wall development in Arabidopsis fibres and increases fibre cell area in Eucalyptus

(2011) Steven G Hussey et al.   BMC PLANT BIOLOGY

Identification and analysis of Phytophthora cactorum genes up-regulated during cyst germination and strawberry infection

(2011) Xiaoren Chen et al.   CURRENT GENETICS

Molecular activities, biosynthesis and evolution of triterpenoid saponins

(2011) Jörg M. Augustin et al.   PHYTOCHEMISTRY

The Strawberry Plant Defense Mechanism: A Molecular Review

(2011) Francisco Amil-Ruiz et al.   PLANT AND CELL PHYSIOLOGY

An Arabidopsis (malectin-like) leucine-rich repeat receptor-like kinase contributes to downy mildew disease

(2011) SOPHIE HOK et al.   PLANT CELL AND ENVIRONMENT

Colletotrichum acutatum interactions with unripe and ripe strawberry fruits and differential responses at histological and transcriptional levels

(2011) M. Guidarelli et al.   PLANT PATHOLOGY

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

Brassinosteroids inhibit pathogen-associated molecular pattern-triggered immune signaling independent of the receptor kinase BAK1

(2011) C. Albrecht et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Brassinosteroids modulate the efficiency of plant immune responses to microbe-associated molecular patterns

(2011) Y. Belkhadir et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The main auxin biosynthesis pathway in Arabidopsis

(2011) K. Mashiguchi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Lectin Receptor Kinase LecRK-I.9 Is a Novel Phytophthora Resistance Component and a Potential Host Target for a RXLR Effector

(2011) Klaas Bouwmeester et al.   PLoS Pathogens

The genome of woodland strawberry (Fragaria vesca)

(2010) Vladimir Shulaev et al.   NATURE GENETICS

Fasciclin-like arabinogalactan proteins: specialization for stem biomechanics and cell wall architecture in Arabidopsis and Eucalyptus

(2010) Colleen P. MacMillan et al.   PLANT JOURNAL

Transcriptional reprogramming regulated by WRKY18 and WRKY40 facilitates powdery mildew infection of Arabidopsis

(2010) Shree P. Pandey et al.   PLANT JOURNAL

Salicylic Acid, a Multifaceted Hormone to Combat Disease

(2009) A. Corina Vlot et al.   Annual Review of Phytopathology

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Isolation and characterization of NgRLK1, a receptor-like kinase of Nicotiana glutinosa that interacts with the elicitin of Phytophthora capsici

(2009) Yeong-Tae Kim et al.   MOLECULAR BIOLOGY REPORTS

The Strawberry Fruit Fra a Allergen Functions in Flavonoid Biosynthesis

(2009) Cristina Muñoz et al.   Molecular Plant

The Arabidopsis CORONATINE INSENSITIVE1 Protein Is a Jasmonate Receptor

(2009) J. Yan et al.   PLANT CELL

Alternative splicing and gene duplication differentially shaped the regulation of isochorismate synthase in Populus and Arabidopsis

(2009) Y. Yuan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Linking development to defense: auxin in plant–pathogen interactions

(2009) Kemal Kazan et al.   TRENDS IN PLANT SCIENCE

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Nondestructive Application of Laser-Induced Fluorescence Spectroscopy for Quantitative Analyses of Phenolic Compounds in Strawberry Fruits (Fragaria x ananassa)

(2008) J. S. Wulf et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Non-targeted analysis of spatial metabolite composition in strawberry (Fragaria×ananassa) flowers

(2008) Kati Hanhineva et al.   PHYTOCHEMISTRY

Activation of the Indole-3-Acetic Acid-Amido Synthetase GH3-8 Suppresses Expansin Expression and Promotes Salicylate- and Jasmonate-Independent Basal Immunity in Rice

(2008) X. Ding et al.   PLANT CELL

Components of genetic variation for resistance of strawberry to Phytophthora cactorum estimated using segregating seedling populations and their parent genotypes

(2008) D. V. Shaw et al.   PLANT PATHOLOGY