Integrated Taxonomy and DNA Barcoding of Alpine Midges (Diptera: Chironomidae)

Delineating closely related species with DNA barcodes for routine biological monitoring

(2015) Melissa E. Carew et al.   FRESHWATER BIOLOGY

DNA sequences and austral taxa indicate generic synonymy ofParatrichocladiusSantos-Abreu withCricotopusWulp (Diptera: Chironomidae)

(2015) PETER S. CRANSTON et al.   SYSTEMATIC ENTOMOLOGY

Methods for species delimitation in bumblebees (Hymenoptera, Apidae,Bombus): towards an integrative approach

(2015) Thomas Lecocq et al.   ZOOLOGICA SCRIPTA

Exploring Genetic Divergence in a Species-Rich Insect Genus Using 2790 DNA Barcodes

(2015) Xiaolong Lin et al.   PLoS One

Runoff and the longitudinal distribution of macroinvertebrates in a glacier-fed stream: implications for the effects of global warming

(2014) Dean Jacobsen et al.   FRESHWATER BIOLOGY

“Candidatus Midichloriaceae” fam. nov. (Rickettsiales), an Ecologically Widespread Clade of Intracellular Alphaproteobacteria

(2013) Matteo Montagna et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A general species delimitation method with applications to phylogenetic placements

(2013) Jiajie Zhang et al.   BIOINFORMATICS

The integration of multiple independent data reveals an unusual response to Pleistocene climatic changes in the hard tickIxodes ricinus

(2013) Daniele Porretta et al.   MOLECULAR ECOLOGY

Assessing the impacts of climatic change on mountain water resources

(2013) Martin Beniston et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Delimiting Species Using Single-Locus Data and the Generalized Mixed Yule Coalescent Approach: A Revised Method and Evaluation on Simulated Data Sets

(2013) Tomochika Fujisawa et al.   SYSTEMATIC BIOLOGY

Adhoc: an R package to calculate ad hoc distance thresholds for DNA barcoding identification

(2013) Gontran Sonet et al.   ZooKeys

Using various lines of evidence to identify Chironomus species (Diptera: Chironomidae) in eastern Canadian lakes

(2013) ISABELLE PROULX et al.   ZOOTAXA

Pachybrachis holerorum (Coleoptera: Chrysomelidae: Cryptocephalinae), a new species from the Apennines, Italy, identified by integration of morphological and molecular data

(2013) MATTEO MONTAGNA et al.   ZOOTAXA

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Spider: An R package for the analysis of species identity and evolution, with particular reference to DNA barcoding

(2012) SAMUEL D. J. BROWN et al.   Molecular Ecology Resources

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Barcoding's next top model: an evaluation of nucleotide substitution models for specimen identification

(2012) Rupert A. Collins et al.   Methods in Ecology and Evolution

Biodiversity under threat in glacier-fed river systems

(2012) Dean Jacobsen et al.   Nature Climate Change

On the inappropriate use of Kimura-2-parameter (K2P) divergences in the DNA-barcoding literature

(2011) Amrita Srivathsan et al.   CLADISTICS

ABGD, Automatic Barcode Gap Discovery for primary species delimitation

(2011) N. PUILLANDRE et al.   MOLECULAR ECOLOGY

Evolution of Cryptocephalus leaf beetles related to C. sericeus (Coleoptera: Chrysomelidae) and the role of hybridization in generating species mtDNA paraphyly

(2011) Jesús Gómez-Zurita et al.   ZOOLOGICA SCRIPTA

Disproportional risk for habitat loss of high-altitude endemic species under climate change

(2010) THOMAS DIRNBÖCK et al.   GLOBAL CHANGE BIOLOGY

Females do count: Documenting Chironomidae (Diptera) species diversity using DNA barcoding

(2010) Torbjørn Ekrem et al.   ORGANISMS DIVERSITY & EVOLUTION

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

The Tempo and Mode of Three‐Dimensional Morphological Evolution in Male Reproductive Structures

(2008) Mark A. McPeek et al.   AMERICAN NATURALIST