Genome-Wide Annotation and Comparative Analysis of Cytochrome P450 Monooxygenases in Basidiomycete Biotrophic Plant Pathogens

Comparative functional characterization of a novel benzoate hydroxylase cytochrome P450 of Fusarium oxysporum

(2015) Pradeepraj Durairaj et al.   ENZYME AND MICROBIAL TECHNOLOGY

Diversity and evolution of cytochrome P450 monooxygenases in Oomycetes

(2015) Mopeli Marshal Sello et al.   Scientific Reports

Genome-wide identification, annotation and characterization of novel thermostable cytochrome P450 monooxygenases from the thermophilic biomass-degrading fungi Thielavia terrestris and Myceliophthora thermophila

(2014) Khajamohiddin Syed et al.   Genes & Genomics

Fungal Cytochrome P450 Monooxygenases: Their Distribution, Structure, Functions, Family Expansion, and Evolutionary Origin

(2014) Wanping Chen et al.   Genome Biology and Evolution

Systematic Identification and Evolutionary Analysis of Catalytically Versatile Cytochrome P450 Monooxygenase Families Enriched in Model Basidiomycete Fungi

(2014) Khajamohiddin Syed et al.   PLoS One

Comparative Analysis of P450 Signature Motifs EXXR and CXG in the Large and Diverse Kingdom of Fungi: Identification of Evolutionarily Conserved Amino Acid Patterns Characteristic of P450 Family

(2014) Khajamohiddin Syed et al.   PLoS One

Cytochrome P450 Monooxygenase CYP53 Family in Fungi: Comparative Structural and Evolutionary Analysis and Its Role as a Common Alternative Anti-Fungal Drug Target

(2014) Poojah Jawallapersand et al.   PLoS One

The genome sequence and effector complement of the flax rust pathogen Melampsora lini

(2014) Adnane Nemri et al.   Frontiers in Plant Science

CYP63A2, a Catalytically Versatile Fungal P450 Monooxygenase Capable of Oxidizing Higher-Molecular-Weight Polycyclic Aromatic Hydrocarbons, Alkylphenols, and Alkanes

(2013) Khajamohiddin Syed et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genomic and Proteomic Dissection of the Ubiquitous Plant Pathogen, Armillaria mellea: Toward a New Infection Model System

(2013) Cassandra Collins et al.   JOURNAL OF PROTEOME RESEARCH

Genomewide annotation and comparative genomics of cytochrome P450 monooxygenases (P450s) in the polypore species Bjerkandera adusta, Ganoderma sp. and Phlebia brevispora

(2013) Khajamohiddin Syed et al.   MYCOLOGIA

Genome sequencing provides insight into the reproductive biology, nutritional mode and ploidy of the fern pathogenMixia osmundae

(2013) Merje Toome et al.   NEW PHYTOLOGIST

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

MycoCosm portal: gearing up for 1000 fungal genomes

(2013) Igor V. Grigoriev et al.   NUCLEIC ACIDS RESEARCH

A world of cytochrome P450s

(2013) D. R. Nelson   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Microbial cytochromes P450: biodiversity and biotechnology. Where do cytochromes P450 come from, what do they do and what can they do for us?

(2013) S. L. Kelly et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genomic Insights into the Atopic Eczema-Associated Skin Commensal Yeast Malassezia sympodialis

(2013) A. Gioti et al.   mBio

Evaluation of structural features in fungal cytochromes P450 predicted to rule catalytic diversification

(2012) Peter Hlavica   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize

(2012) Hitoshi Suzuki et al.   BMC GENOMICS

Systematic and searchable classification of cytochrome P450 proteins encoded by fungal and oomycete genomes

(2012) Venkatesh Moktali et al.   BMC GENOMICS

P450 monooxygenases (P450ome) of the model white rot fungusPhanerochaete chrysosporium

(2012) Khajamohiddin Syed et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

(2012) E. Morin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis

(2012) E. Fernandez-Fueyo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

(2012) D. Floudas et al.   SCIENCE

Genome sequence of the model medicinal mushroom Ganoderma lucidum

(2012) Shilin Chen et al.   Nature Communications

A multi-omic map of the lipid-producing yeast Rhodosporidium toruloides

(2012) Zhiwei Zhu et al.   Nature Communications

Molecular identification and functional characterization of cytochrome P450 monooxygenases from the brown-rot basidiomycete Postia placenta

(2011) Masamichi Ide et al.   ARCHIVES OF MICROBIOLOGY

Insight into functional diversity of cytochrome P450 in the white-rot basidiomycete Phanerochaete chrysosporium: Involvement of versatile monooxygenase

(2011) Shinji Hirosue et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Obligate biotrophy features unraveled by the genomic analysis of rust fungi

(2011) S. Duplessis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Accelerated Profile HMM Searches

(2011) Sean R. Eddy   PLoS Computational Biology

Arthropod CYPomes illustrate the tempo and mode in P450 evolution

(2010) R. Feyereisen   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Progress in tracing the evolutionary paths of cytochrome P450

(2010) David R. Nelson   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Pathogenicity Determinants in Smut Fungi Revealed by Genome Comparison

(2010) J. Schirawski et al.   SCIENCE

Prediction and analysis of the modular structure of cytochrome P450 monooxygenases

(2010) Demet Sirim et al.   BMC STRUCTURAL BIOLOGY

Identification of PpoA fromAspergillus nidulansas a Fusion Protein of a Fatty Acid Heme Dioxygenase/Peroxidase and a Cytochrome P450

(2009) Florian Brodhun et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome, transcriptome, and secretome analysis of wood decay fungusPostia placentasupports unique mechanisms of lignocellulose conversion

(2009) Diego Martinez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterization of Active Site Structure in CYP121

(2008) Kirsty J. McLean et al.   JOURNAL OF BIOLOGICAL CHEMISTRY