Rapid High Resolution Genotyping of Francisella tularensis by Whole Genome Sequence Comparison of Annotated Genes (“MLST+”)

Real-Time Genomic Epidemiological Evaluation of Human Campylobacter Isolates by Use of Whole-Genome Multilocus Sequence Typing

(2013) A. J. Cody et al.   JOURNAL OF CLINICAL MICROBIOLOGY

MLST revisited: the gene-by-gene approach to bacterial genomics

(2013) Martin C. J. Maiden et al.   NATURE REVIEWS MICROBIOLOGY

Genome characterisation of the genus Francisella reveals insight into similar evolutionary paths in pathogens of mammals and fish

(2012) Andreas Sjödin et al.   BMC GENOMICS

Short read sequence typing (SRST): multi-locus sequence types from short reads

(2012) Michael Inouye et al.   BMC GENOMICS

The phylogeographic pattern ofFrancisella tularensisin Sweden indicates a Scandinavian origin of Eurosiberian tularaemia

(2012) Edvin Karlsson et al.   ENVIRONMENTAL MICROBIOLOGY

Detection of a Possible Bioterrorism Agent, Francisella sp., in a Clinical Specimen by Use of Next-Generation Direct DNA Sequencing

(2012) M. Kuroda et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Transforming clinical microbiology with bacterial genome sequencing

(2012) Xavier Didelot et al.   NATURE REVIEWS GENETICS

High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity

(2012) Nicholas J. Loman et al.   NATURE REVIEWS MICROBIOLOGY

Phylogeography of Francisella tularensis subspecies holarctica from the country of Georgia

(2011) Gvantsa Chanturia et al.   BMC MICROBIOLOGY

A viral grandfather: genomics in 2010 contradict Darwin’s vision of evolution

(2011) D. Raoult   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

MLVA and SNP analysis identified a unique genetic cluster in Bulgarian Bacillus anthracis strains

(2011) M. Antwerpen et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology

(2011) Alexander Mellmann et al.   PLoS One

Rapid Typing of Coxiella burnetii

(2011) Heidie M. Hornstra et al.   PLoS One

Molecular Epidemiology ofFrancisella tularensisin the United States

(2009) Kiersten J. Kugeler et al.   CLINICAL INFECTIOUS DISEASES

Phylogeography of Francisella tularensis: Global Expansion of a Highly Fit Clone

(2009) A. J. Vogler et al.   JOURNAL OF BACTERIOLOGY

A Real-Time PCR Array for Hierarchical Identification of Francisella Isolates

(2009) Kerstin Svensson et al.   PLoS One

Molecular Evolutionary Consequences of Niche Restriction in Francisella tularensis, a Facultative Intracellular Pathogen

(2009) Pär Larsson et al.   PLoS Pathogens

Re-emergence of tularemia in Germany: Presence of Francisella tularensis in different rodent species in endemic areas

(2008) Philipp Kaysser et al.   BMC INFECTIOUS DISEASES

An optimized, multiplexed multi-locus variable-number tandem repeat analysis system for genotypingFrancisella tularensis

(2008) A.J. Vogler et al.   LETTERS IN APPLIED MICROBIOLOGY