Real-Time Genomic Epidemiological Evaluation of Human Campylobacter Isolates by Use of Whole-Genome Multilocus Sequence Typing

Resolution of a Meningococcal Disease Outbreak from Whole-Genome Sequence Data with Rapid Web-Based Analysis Methods

(2012) K. A. Jolley et al.   JOURNAL OF CLINICAL MICROBIOLOGY

A Longitudinal 6-Year Study of the Molecular Epidemiology of Clinical Campylobacter Isolates in Oxfordshire, United Kingdom

(2012) A. J. Cody et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Campylobacter sequence typing databases: applications and future prospects

(2012) F. M. Colles et al.   MICROBIOLOGY-SGM

Ribosomal multilocus sequence typing: universal characterization of bacteria from domain to strain

(2012) K. A. Jolley et al.   MICROBIOLOGY-SGM

High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity

(2012) Nicholas J. Loman et al.   NATURE REVIEWS MICROBIOLOGY

Rapid Whole-Genome Sequencing for Investigation of a Neonatal MRSA Outbreak

(2012) Claudio U. Köser et al.   NEW ENGLAND JOURNAL OF MEDICINE

A pilot study of rapid benchtop sequencing ofStaphylococcus aureusandClostridium difficilefor outbreak detection and surveillance

(2012) David W Eyre et al.   BMJ Open

A Gene-By-Gene Approach to Bacterial Population Genomics: Whole Genome MLST of Campylobacter

(2012) Samuel K. Sheppard et al.   Genes

BIGSdb: Scalable analysis of bacterial genome variation at the population level

(2011) Keith A Jolley et al.   BMC BIOINFORMATICS

Comparison of Molecular Typing Methods Useful for Detecting Clusters of Campylobacter jejuni and C. coli Isolates through Routine Surveillance

(2011) C. G. Clark et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Niche segregation and genetic structure of Campylobacter jejuni populations from wild and agricultural host species

(2011) SAMUEL K. SHEPPARD et al.   MOLECULAR ECOLOGY

Epidemic Profile of Shiga-Toxin–ProducingEscherichia coliO104:H4 Outbreak in Germany

(2011) Christina Frank et al.   NEW ENGLAND JOURNAL OF MEDICINE

Rapid Pneumococcal Evolution in Response to Clinical Interventions

(2011) N. J. Croucher et al.   SCIENCE

Molecular Epidemiology of Campylobacter jejuni in a Geographically Isolated Country with a Uniquely Structured Poultry Industry

(2010) P. Mullner et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Evolutionary Dynamics of Complete Campylobacter Pan-Genomes and the Bacterial Species Concept

(2010) Tristan Lefébure et al.   Genome Biology and Evolution

The growing UK epidemic of human campylobacteriosis

(2010) Norval JC Strachan et al.   LANCET

Evolution of MRSA During Hospital Transmission and Intercontinental Spread

(2010) S. R. Harris et al.   SCIENCE

CampylobacterGenotyping to Determine the Source of Human Infection

(2009) Samuel K. Sheppard et al.   CLINICAL INFECTIOUS DISEASES

Assigning the source of human campylobacteriosis in New Zealand: A comparative genetic and epidemiological approach

(2009) Petra Mullner et al.   INFECTION GENETICS AND EVOLUTION

Campylobacter genotypes from food animals, environmental sources and clinical disease in Scotland 2005/6

(2009) Samuel K. Sheppard et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Rapid Evolution and the Importance of Recombination to the Gastroenteric Pathogen Campylobacter jejuni

(2008) D. J. Wilson et al.   MOLECULAR BIOLOGY AND EVOLUTION

Convergence of Campylobacter Species: Implications for Bacterial Evolution

(2008) S. K. Sheppard et al.   SCIENCE

Tracing the Source of Campylobacteriosis

(2008) Daniel J. Wilson et al.   PLoS Genetics