High Genetic Diversity and Novelty in Eukaryotic Plankton Assemblages Inhabiting Saline Lakes in the Qaidam Basin

Effects of light and prey availability on Arctic freshwater protist communities examined by high-throughput DNA and RNA sequencing

(2014) Sophie Charvet et al.   FEMS MICROBIOLOGY ECOLOGY

Characterization of the 18S rRNA Gene for Designing Universal Eukaryote Specific Primers

(2014) Kenan Hadziavdic et al.   PLoS One

The blood alga: phylogeny of Haematococcus (Chlorophyceae) inferred from ribosomal RNA gene sequence data

(2013) Mark A. Buchheim et al.   EUROPEAN JOURNAL OF PHYCOLOGY

Microbial biodiversity in saline shallow lakes of the Monegros Desert, Spain

(2013) Emilio O. Casamayor et al.   FEMS MICROBIOLOGY ECOLOGY

High genetic diversity and novelty in planktonic protists inhabiting inland and coastal high salinity water bodies

(2013) Xavier Triadó-Margarit et al.   FEMS MICROBIOLOGY ECOLOGY

Geographic distance and ecosystem size determine the distribution of smallest protists in lacustrine ecosystems

(2013) Cécile Lepère et al.   FEMS MICROBIOLOGY ECOLOGY

Unveiling Distribution Patterns of Freshwater Phytoplankton by a Next Generation Sequencing Based Approach

(2013) Alexander Eiler et al.   PLoS One

Surprising Prokaryotic and Eukaryotic Diversity, Community Structure and Biogeography of Ethiopian Soda Lakes

(2013) Anders Lanzén et al.   PLoS One

Protist community composition in the Pacific sector of the Southern Ocean during austral summer 2010

(2013) Christian Wolf et al.   POLAR BIOLOGY

Characterization of eukaryotic microbial diversity in hypersaline Lake Tyrrell, Australia

(2013) Karla B. Heidelberg et al.   Frontiers in Microbiology

Genetic diversity of planktonic eukaryotes in high mountain lakes (Central Pyrenees, Spain)

(2012) Xavier Triadó-Margarit et al.   ENVIRONMENTAL MICROBIOLOGY

Short-term dynamics of diversity patterns: evidence of continual reassembly within lacustrine small eukaryotes

(2012) Jean-François Mangot et al.   ENVIRONMENTAL MICROBIOLOGY

Biogeography of bacterial communities exposed to progressive long-term environmental change

(2012) Ramiro Logares et al.   ISME Journal

Marine Protistan Diversity

(2011) David A. Caron et al.   Annual Review of Marine Science

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

(2011) B. J. Haas et al.   GENOME RESEARCH

De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities

(2011) Priya Narasingarao et al.   ISME Journal

Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea

(2011) Daniel PR Herlemann et al.   ISME Journal

Hypervariable regions (V1–V9) of the dinoflagellate 18S rRNA using a large dataset for marker considerations

(2011) Jang-Seu Ki   JOURNAL OF APPLIED PHYCOLOGY

Molecular Detection, Quantification, and Diversity Evaluation of Microalgae

(2011) Vinitha Ebenezer et al.   MARINE BIOTECHNOLOGY

Prokaryotic Diversity in Aran-Bidgol Salt Lake, the Largest Hypersaline Playa in Iran

(2011) Ali Makhdoumi-Kakhki et al.   MICROBES AND ENVIRONMENTS

Emerging Diversity within Chrysophytes, Choanoflagellates and Bicosoecids Based on Molecular Surveys

(2011) Javier del Campo et al.   PROTIST

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

(2010) Susan M. Huse et al.   ENVIRONMENTAL MICROBIOLOGY

Sequence diversity and novelty of natural assemblages of picoeukaryotes from the Indian Ocean

(2010) Ramon Massana et al.   ISME Journal

Composition and genetic diversity of picoeukaryotes in subtropical coastal waters as revealed by 454 pyrosequencing

(2010) Man Kit Cheung et al.   ISME Journal

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water

(2010) THORSTEN STOECK et al.   MOLECULAR ECOLOGY

Diversity in a hidden world: potential and limitation of next-generation sequencing for surveys of molecular diversity of eukaryotic microorganisms

(2010) RALPH MEDINGER et al.   MOLECULAR ECOLOGY

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Functional Biogeography as Evidence of Gene Transfer in Hypersaline Microbial Communities

(2010) J. Jacob Parnell et al.   PLoS One

Microbial Biogeography of Six Salt Lakes in Inner Mongolia, China, and a Salt Lake in Argentina

(2009) E. Pagaling et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Global phylogenetic community structure and β-diversity patterns in surface bacterioplankton metacommunities

(2009) A Barberán et al.   AQUATIC MICROBIAL ECOLOGY

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

(2009) Victor Kunin et al.   ENVIRONMENTAL MICROBIOLOGY

Seasonal changes in bacterial diversity in the Salton Sea

(2009) Jesse G. Dillon et al.   HYDROBIOLOGIA

Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities

(2009) Anders F Andersson et al.   ISME Journal

Global ecological patterns in uncultured Archaea

(2009) Jean-Christophe Auguet et al.   ISME Journal

Genetic Diversity of Eukaryotic Plankton Assemblages in Eastern Tibetan Lakes Differing by their Salinity and Altitude

(2009) Qinglong L. Wu et al.   MICROBIAL ECOLOGY

Accurate determination of microbial diversity from 454 pyrosequencing data

(2009) Christopher Quince et al.   NATURE METHODS

Feasibility of Transferring Fluorescent In Situ Hybridization Probes to an 18S rRNA Gene Phylochip and Mapping of Signal Intensities

(2008) K. Metfies et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Unexpected Importance of Potential Parasites in the Composition of the Freshwater Small-Eukaryote Community

(2008) C. Lepere et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Novelty and spatio–temporal heterogeneity in the bacterial diversity of hypersaline Lake Tebenquiche (Salar de Atacama)

(2008) Cecilia Demergasso et al.   EXTREMOPHILES

The Molecular Diversity of Freshwater Picoeukaryotes Reveals High Occurrence of Putative Parasitoids in the Plankton

(2008) Emilie Lefèvre et al.   PLoS One

Structure of the Mammalian 80S Ribosome at 8.7 Å Resolution

(2008) Preethi Chandramouli et al.   STRUCTURE