Surprising Prokaryotic and Eukaryotic Diversity, Community Structure and Biogeography of Ethiopian Soda Lakes

Comparative molecular analysis of chemolithoautotrophic bacterial diversity and community structure from coastal saline soils, Gujarat, India

(2012) Basit Yousuf et al.   BMC MICROBIOLOGY

Metatranscriptomics of the marine sponge Geodia barretti: tackling phylogeny and function of its microbial community

(2012) Regina Radax et al.   ENVIRONMENTAL MICROBIOLOGY

Geographic distance and pH drive bacterial distribution in alkaline lake sediments across Tibetan Plateau

(2012) Jinbo Xiong et al.   ENVIRONMENTAL MICROBIOLOGY

Free-living and aggregate-associated Planctomycetes in the Black Sea

(2012) Clara A. Fuchsman et al.   FEMS MICROBIOLOGY ECOLOGY

Microbial diversity under extreme euxinia: Mahoney Lake, Canada

(2012) V. KLEPAC-CERAJ et al.   Geobiology

Bacterial diversity in relation to secondary production and succession on surfaces of the kelp Laminaria hyperborea

(2012) Mia M Bengtsson et al.   ISME Journal

Distinct and diverse anaerobic bacterial communities in boreal lakes dominated by candidate division OD1

(2012) Sari Peura et al.   ISME Journal

Deep underwater seismic explosion experiments and their possible ecological impact – The case of Lake Arenguade – Central Ethiopian highlands

(2012) Misgina Belachew Girma et al.   LIMNOLOGICA

Ecophysiology of an Ammonia-Oxidizing Archaeon Adapted to Low-Salinity Habitats

(2012) Annika C. Mosier et al.   MICROBIAL ECOLOGY

Groundtruthing Next-Gen Sequencing for Microbial Ecology–Biases and Errors in Community Structure Estimates from PCR Amplicon Pyrosequencing

(2012) Charles K. Lee et al.   PLoS One

CREST – Classification Resources for Environmental Sequence Tags

(2012) Anders Lanzén et al.   PLoS One

Correlating microbial community profiles with geochemical data in highly stratified sediments from the Arctic Mid-Ocean Ridge

(2012) S. L. Jorgensen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance

(2012) Steven W. Kembel et al.   PLoS Computational Biology

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Removing Noise From Pyrosequenced Amplicons

(2011) Christopher Quince et al.   BMC BIOINFORMATICS

The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology

(2011) Michael Pester et al.   CURRENT OPINION IN MICROBIOLOGY

On the suitability of short reads of 16S rRNA for phylogeny-based analyses in environmental surveys

(2011) Patricio Jeraldo et al.   ENVIRONMENTAL MICROBIOLOGY

Exploring the composition and diversity of microbial communities at the Jan Mayen hydrothermal vent field using RNA and DNA

(2011) Anders Lanzén et al.   FEMS MICROBIOLOGY ECOLOGY

High abundances of aerobic anoxygenic phototrophs in saline steppe lakes

(2011) Hana Medová et al.   FEMS MICROBIOLOGY ECOLOGY

Molecular diversity of methanogens and identification of Methanolobus sp. as active methylotrophic Archaea in Lonar crater lake sediments

(2011) Chakkiath Paul Antony et al.   FEMS MICROBIOLOGY ECOLOGY

Fuchsiella alkaliacetigena gen. nov., sp. nov., an alkaliphilic, lithoautotrophic homoacetogen from a soda lake

(2011) T. N. Zhilina et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methylophaga lonarensis sp. nov., a moderately haloalkaliphilic methylotroph isolated from the soda lake sediments of a meteorite impact crater

(2011) C. P. Antony et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Freshwater bacterioplankton richness in oligotrophic lakes depends on nutrient availability rather than on species–area relationships

(2011) Jürg Brendan Logue et al.   ISME Journal

Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea

(2011) Daniel PR Herlemann et al.   ISME Journal

Do Patterns of Bacterial Diversity along Salinity Gradients Differ from Those Observed for Macroorganisms?

(2011) Jianjun Wang et al.   PLoS One

Integrative Taxonomy of the Pavlovophyceae (Haptophyta): A Reassessment

(2011) El Mahdi Bendif et al.   PROTIST

Isotopic Signature of N2O Produced by Marine Ammonia-Oxidizing Archaea

(2011) A. E. Santoro et al.   SCIENCE

The Microbial Sulfur Cycle at Extremely Haloalkaline Conditions of Soda Lakes

(2011) Dimitry Y. Sorokin et al.   Frontiers in Microbiology

Molecular biomass and MetaTaxogenomic assessment of soil microbial communities as influenced by soil DNA extraction procedure

(2011) Sébastien Terrat et al.   Microbial Biotechnology

Seasonal dynamics of bacterial biofilms on the kelp Laminaria hyperborea

(2010) MM Bengtsson et al.   AQUATIC MICROBIAL ECOLOGY

Homologues of nitrite reductases in ammonia-oxidizing archaea: diversity and genomic context

(2010) Rita Bartossek et al.   ENVIRONMENTAL MICROBIOLOGY

Temporal bacterial diversity and detection of putative methanotrophs in surface mats of Lonar crater lake

(2010) Venkata Prasad Surakasi et al.   JOURNAL OF BASIC MICROBIOLOGY

Nitrification in Mono Lake, California: Activity and community composition during contrasting hydrological regimes

(2010) Stephen A. Carini et al.   LIMNOLOGY AND OCEANOGRAPHY

Euxinic Freshwater Hypolimnia Promote Bacterial Endemicity in Continental Areas

(2010) Albert Barberán et al.   MICROBIAL ECOLOGY

The dynamic genome of Hydra

(2010) Jarrod A. Chapman et al.   NATURE

Rfam: Wikipedia, clans and the "decimal" release

(2010) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

Dormancy contributes to the maintenance of microbial diversity

(2010) S. E. Jones et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparison of Species Richness Estimates Obtained Using Nearly Complete Fragments and Simulated Pyrosequencing-Generated Fragments in 16S rRNA Gene-Based Environmental Surveys

(2009) N. Youssef et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Archaeal Diversity and the Prevalence of Crenarchaeota in Salt Marsh Sediments

(2009) K. A. Nelson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Infernal 1.0: inference of RNA alignments

(2009) E. P. Nawrocki et al.   BIOINFORMATICS

Seasonal changes in bacterial diversity in the Salton Sea

(2009) Jesse G. Dillon et al.   HYDROBIOLOGIA

Nitriliruptor alkaliphilus gen. nov., sp. nov., a deep-lineage haloalkaliphilic actinobacterium from soda lakes capable of growth on aliphatic nitriles, and proposal of Nitriliruptoraceae fam. nov. and Nitriliruptorales ord. nov.

(2009) D. Yu. Sorokin et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Phycisphaera mikurensis gen. nov., sp. nov., isolated from a marine alga, and proposal of Phycisphaeraceae fam. nov., Phycisphaerales ord. nov. and Phycisphaerae classis nov. in the phylum Planctomycetes

(2009) Yukiyo Fukunaga et al.   JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY

Molecular analysis of prokaryotic diversity in the deep subsurface of the former Homestake gold mine, South Dakota, USA

(2009) Gurdeep Rastogi et al.   JOURNAL OF MICROBIOLOGY

Genetic Diversity of Eukaryotic Plankton Assemblages in Eastern Tibetan Lakes Differing by their Salinity and Altitude

(2009) Qinglong L. Wu et al.   MICROBIAL ECOLOGY

Spatial and Temporal Patterns in the Microbial Diversity of a Meromictic Soda Lake in Washington State

(2008) P. A. Dimitriu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

It's all relative: ranking the diversity of aquatic bacterial communities

(2008) Allison K. Shaw et al.   ENVIRONMENTAL MICROBIOLOGY

The rational exploration of microbial diversity

(2008) Christopher Quince et al.   ISME Journal

Non-climatic growth of the saline Lake Beseka, Main Ethiopian Rift

(2008) A. Goerner et al.   JOURNAL OF ARID ENVIRONMENTS

Millimeter-scale genetic gradients and community-level molecular convergence in a hypersaline microbial mat

(2008) Victor Kunin et al.   Molecular Systems Biology

Simultaneous Assessment of Soil Microbial Community Structure and Function through Analysis of the Meta-Transcriptome

(2008) Tim Urich et al.   PLoS One