Circular RNA architecture and differentiation during leaf bud to young leaf development in tea (Camellia sinensis)

Small but powerful: function of microRNAs in plant development

(2018) Haiping Liu et al.   PLANT CELL REPORTS

Draft genome sequence ofCamellia sinensisvar.sinensisprovides insights into the evolution of the tea genome and tea quality

(2018) Chaoling Wei et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Improvement in Fruit Quality by Overexpressing miR399a in Woodland Strawberry

(2017) Yan Wang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

PlantcircBase: A Database for Plant Circular RNAs

(2017) Qinjie Chu et al.   Molecular Plant

The Tea Tree Genome Provides Insights into Tea Flavor and Independent Evolution of Caffeine Biosynthesis

(2017) En-Hua Xia et al.   Molecular Plant

Circular RNAs mediated by transposons are associated with transcriptomic and phenotypic variation in maize

(2017) Lu Chen et al.   NEW PHYTOLOGIST

Repression of miR156 by miR159 Regulates the Timing of the Juvenile-to-Adult Transition in Arabidopsis

(2017) Changkui Guo et al.   PLANT CELL

Heat stress alters genome-wide profiles of circular RNAs in Arabidopsis

(2017) Ting Pan et al.   PLANT MOLECULAR BIOLOGY

A comprehensive overview and evaluation of circular RNA detection tools

(2017) Xiangxiang Zeng et al.   PLoS Computational Biology

Expression of Key Structural Genes of the Phenylpropanoid Pathway Associated with Catechin Epimerization in Tea Cultivars

(2017) Changsong Chen et al.   Frontiers in Plant Science

Genome-Wide Identification of Circular RNAs in Arabidopsis thaliana

(2017) Gang Chen et al.   Frontiers in Plant Science

Identifying and Characterizing the Circular RNAs during the Lifespan of Arabidopsis Leaves

(2017) Tengfei Liu et al.   Frontiers in Plant Science

Transcriptome Profiling Using Single-Molecule Direct RNA Sequencing Approach for In-depth Understanding of Genes in Secondary Metabolism Pathways of Camellia sinensis

(2017) Qingshan Xu et al.   Frontiers in Plant Science

Characterization and Expression Profiling of Camellia sinensis Cinnamate 4-hydroxylase Genes in Phenylpropanoid Pathways

(2017) Jinxin Xia et al.   Genes

Genome-wide identification and characterization of circular RNAs by high throughput sequencing in soybean

(2017) Wei Zhao et al.   Scientific Reports

Genome-wide identification of microRNAs responsive to Ectropis oblique feeding in tea plant (Camellia sinensis L.)

(2017) Anburaj Jeyaraj et al.   Scientific Reports

Deciphering the roles of circRNAs on chilling injury in tomato

(2016) Jinhua Zuo et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Differential transcriptome analysis of leaves of tea plant (Camellia sinensis) provides comprehensive insights into the defense responses to Ectropis oblique attack using RNA-Seq

(2016) Ya-Nan Wang et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Absolute quantification of microRNAs in green tea (Camellia sinensis ) by stem-loop quantitative real-time PCR

(2016) Ying-Hui Hou et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

Detecting circular RNAs: bioinformatic and experimental challenges

(2016) Linda Szabo et al.   NATURE REVIEWS GENETICS

The biogenesis and emerging roles of circular RNAs

(2016) Ling-Ling Chen   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Small RNA and degradome profiling reveals important roles for microRNAs and their targets in tea plant response to drought stress

(2016) Sheng-Chuan Liu et al.   PHYSIOLOGIA PLANTARUM

Functional analysis of CsCBF3 transcription factor in tea plant (Camellia sinensis) under cold stress

(2016) Ying Yin et al.   PLANT GROWTH REGULATION

Deregulation of the OsmiR160 Target Gene OsARF18 Causes Growth and Developmental Defects with an Alteration of Auxin Signaling in Rice

(2016) Jian Huang et al.   Scientific Reports

Identification of Circular RNAs from the Parental Genes Involved in Multiple Aspects of Cellular Metabolism in Barley

(2016) Behrooz Darbani et al.   Frontiers in Plant Science

Genetic Divergence between Camellia sinensis and Its Wild Relatives Revealed via Genome-Wide SNPs from RAD Sequencing

(2016) Hua Yang et al.   PLoS One

Selection of suitable reference genes for qRT-PCR normalization during leaf development and hormonal stimuli in tea plant (Camellia sinensis)

(2016) Zhi-Jun Wu et al.   Scientific Reports

Molecular Cloning and Characterization of Spermine Synthesis Gene Associated with Cold Tolerance in Tea Plant (Camellia sinensis)

(2015) Xujun Zhu et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Identification and characterization of microRNAs at different flowering developmental stages in moso bamboo (Phyllostachys edulis) by high-throughput sequencing

(2015) Jian Gao et al.   MOLECULAR GENETICS AND GENOMICS

Widespread noncoding circular RNAs in plants

(2015) Chu-Yu Ye et al.   NEW PHYTOLOGIST

Comparison of circular RNA prediction tools

(2015) Thomas B. Hansen et al.   NUCLEIC ACIDS RESEARCH

Transcriptome-wide investigation of circular RNAs in rice

(2015) Tingting Lu et al.   RNA

Thirteen Camellia chloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships

(2014) Hui Huang et al.   BMC EVOLUTIONARY BIOLOGY

Identification and characterization of cold-responsive microRNAs in tea plant (Camellia sinensis) and their targets using high-throughput sequencing and degradome analysis

(2014) Yue Zhang et al.   BMC PLANT BIOLOGY

Complementary Sequence-Mediated Exon Circularization

(2014) Xiao-Ou Zhang et al.   CELL

Differential expression of microRNAs in dormant bud of tea [Camellia sinensis (L.) O. Kuntze]

(2014) Anburaj Jeyaraj et al.   PLANT CELL REPORTS

Circular RNA Is Expressed across the Eukaryotic Tree of Life

(2014) Peter L. Wang et al.   PLoS One

Circular RNAs: diversity of form and function

(2014) Erika Lasda et al.   RNA

Rice miR172 induces flowering by suppressing OsIDS1 and SNB, two AP2 genes that negatively regulate expression of Ehd1 and florigens

(2014) Yang-Seok Lee et al.   Rice

The complex transcriptional landscape of the anucleate human platelet

(2013) Paul F Bray et al.   BMC GENOMICS

Identification of miRNAs and their targets in tea (Camellia sinensis)

(2013) Quan-wu Zhu et al.   Journal of Zhejiang University-SCIENCE B

Natural RNA circles function as efficient microRNA sponges

(2013) Thomas B. Hansen et al.   NATURE

Circular RNAs are a large class of animal RNAs with regulatory potency

(2013) Sebastian Memczak et al.   NATURE

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

Genome Size Variation among and within Camellia Species by Using Flow Cytometric Analysis

(2013) Hui Huang et al.   PLoS One

Comparative Chloroplast Genomes of Camellia Species

(2013) Jun-Bo Yang et al.   PLoS One

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Transcriptional Regulation of Arabidopsis MIR168a and ARGONAUTE1 Homeostasis in Abscisic Acid and Abiotic Stress Responses

(2012) W. Li et al.   PLANT PHYSIOLOGY

Venom gland transcriptomes of two elapid snakes (Bungarus multicinctus and Naja atra) and evolution of toxin genes

(2011) Yu Jiang et al.   BMC GENOMICS

CsICE1 and CsCBF1: two transcription factors involved in cold responses in Camellia sinensis

(2011) Yu Wang et al.   PLANT CELL REPORTS

Diversity distribution and population structure of tea germplasms in China revealed by EST-SSR markers

(2011) Ming-Zhe Yao et al.   Tree Genetics & Genomes

TopHat-Fusion: an algorithm for discovery of novel fusion transcripts

(2011) Daehwan Kim et al.   GENOME BIOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

RNA-Seq gene expression estimation with read mapping uncertainty

(2009) Bo Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Identification, characterization and utilization of unigene derived microsatellite markers in tea (Camellia sinensis L.)

(2009) Ram Sharma et al.   BMC PLANT BIOLOGY