Hydration and diffusion processes shape microbial community organization and function in model soil aggregates

Moving away from the geostatistical lamppost: Why, where, and how does the spatial heterogeneity of soils matter?

(2015) Philippe C. Baveye et al.   ECOLOGICAL MODELLING

Roots at the percolation threshold

(2015) Eva Kroener et al.   PHYSICAL REVIEW E

Microbial hotspots and hot moments in soil: Concept & review

(2015) Yakov Kuzyakov et al.   SOIL BIOLOGY & BIOCHEMISTRY

Multi-scale approach to invasion percolation of rock fracture networks

(2014) Ali N. Ebrahimi et al.   JOURNAL OF HYDROLOGY

Localization of soil organic matter in soil aggregates using synchrotron-based X-ray microtomography

(2014) Stephan Peth et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil microbial organic nitrogen uptake is regulated by carbon availability

(2014) Mark Farrell et al.   SOIL BIOLOGY & BIOCHEMISTRY

New Approach to Measure Soil ParticulateOrganic Matter in Intact Samples Using X-ray Computed Microtomography

(2014) A. N. Kravchenko et al.   SOIL SCIENCE SOCIETY OF AMERICA JOURNAL

Pore Structure of Natural and Regenerated Soil Aggregates: An X-Ray Computed Tomography Analysis

(2014) Muhammad Naveed et al.   SOIL SCIENCE SOCIETY OF AMERICA JOURNAL

Intra-aggregate Pore Structure Influences Phylogenetic Composition of Bacterial Community in Macroaggregates

(2014) Alexandra N. Kravchenko et al.   SOIL SCIENCE SOCIETY OF AMERICA JOURNAL

Microbial dispersal in unsaturated porous media: Characteristics of motile bacterial cell motions in unsaturated angular pore networks

(2014) Ali N. Ebrahimi et al.   WATER RESOURCES RESEARCH

Modeling biofilm dynamics and hydraulic properties in variably saturated soils using a channel network model

(2014) Ravid Rosenzweig et al.   WATER RESOURCES RESEARCH

Trophic interactions induce spatial self-organization of microbial consortia on rough surfaces

(2014) Gang Wang et al.   Scientific Reports

Genetic algorithm-based pore network extraction from micro-computed tomography images

(2013) Ali Nejad Ebrahimi et al.   CHEMICAL ENGINEERING SCIENCE

The life beneath our feet

(2013) Janet K. Jansson et al.   NATURE

Shallow breathing: bacterial life at low O2

(2013) Rachel L. Morris et al.   NATURE REVIEWS MICROBIOLOGY

Nitrous oxide emissions from soils: how well do we understand the processes and their controls?

(2013) K. Butterbach-Bahl et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Responses of soil heterotrophic respiration to moisture availability: An exploration of processes and models

(2013) Fernando E. Moyano et al.   SOIL BIOLOGY & BIOCHEMISTRY

Hydration dynamics promote bacterial coexistence on rough surfaces

(2012) Gang Wang et al.   ISME Journal

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

Redox potential (Eh) and pH as drivers of soil/plant/microorganism systems: a transdisciplinary overview pointing to integrative opportunities for agronomy

(2012) Olivier Husson   PLANT AND SOIL

Digging deeper to find unique microbial communities: The strong effect of depth on the structure of bacterial and archaeal communities in soil

(2012) Kathryn G. Eilers et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil physics meets soil biology: Towards better mechanistic prediction of greenhouse gas emissions from soil

(2012) Sergey Blagodatsky et al.   SOIL BIOLOGY & BIOCHEMISTRY

Can intra-aggregate pore structures affect the aggregate's effectiveness in protecting carbon?

(2012) K. Ananyeva et al.   SOIL BIOLOGY & BIOCHEMISTRY

Water and Oxygen Dependence of Growing in Silica Sand Capillary Fringes

(2012) Daniel Jost et al.   VADOSE ZONE JOURNAL

A Hydration-Based Biophysical Index for the Onset of Soil Microbial Coexistence

(2012) Gang Wang et al.   Scientific Reports

Soil nitrate reducing processes – drivers, mechanisms for spatial variation, and significance for nitrous oxide production

(2012) Madeline Giles et al.   Frontiers in Microbiology

Microbial control over carbon cycling in soil

(2012) Joshua P. Schimel et al.   Frontiers in Microbiology

Persistence of soil organic matter as an ecosystem property

(2011) Michael W. I. Schmidt et al.   NATURE

A new formulation for pore-network modeling of two-phase flow

(2011) A. Raoof et al.   WATER RESOURCES RESEARCH

Aqueous films limit bacterial cell motility and colony expansion on partially saturated rough surfaces

(2010) Gang Wang et al.   ENVIRONMENTAL MICROBIOLOGY

Microorganisms and climate change: terrestrial feedbacks and mitigation options

(2010) Brajesh K. Singh et al.   NATURE REVIEWS MICROBIOLOGY

Hydration-controlled bacterial motility and dispersal on surfaces

(2010) A. Dechesne et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Network model investigation of interfacial area, capillary pressure and saturation relationships in granular porous media

(2010) V. Joekar-Niasar et al.   WATER RESOURCES RESEARCH

Three-dimensional simulations of biofilm growth in porous media

(2009) D. A. Graf von der Schulenburg et al.   AICHE JOURNAL

Challenges to incorporating spatially and temporally explicit phenomena (hotspots and hot moments) in denitrification models

(2009) Peter M. Groffman et al.   BIOGEOCHEMISTRY

3D geometric structures and biological activity: Application to microbial soil organic matter decomposition in pore space

(2008) Olivier Monga et al.   ECOLOGICAL MODELLING

Microbial contributions to climate change through carbon cycle feedbacks

(2008) Richard D Bardgett et al.   ISME Journal

A mechanistic treatment of the dominant soil nitrogen cycling processes: Model development, testing, and application

(2008) F. Maggi et al.   JOURNAL OF GEOPHYSICAL RESEARCH

Spatial complexity of soil organic matter forms at nanometre scales

(2008) Johannes Lehmann et al.   Nature Geoscience