Co-transcriptional production of RNA–DNA hybrids for simultaneous release of multiple split functionalities

GC skew at the 5' and 3' ends of human genes links R-loop formation to epigenetic regulation and transcription termination

(2013) P. A. Ginno et al.   GENOME RESEARCH

Activation of different split functionalities on re-association of RNA–DNA hybrids

(2013) Kirill A. Afonin et al.   Nature Nanotechnology

In Silico, In Vitro, and In Vivo Studies Indicate the Potential Use of Bolaamphiphiles for Therapeutic siRNAs Delivery

(2013) Taejin Kim et al.   Molecular Therapy-Nucleic Acids

RNA-Based Therapeutics: Current Progress and Future Prospects

(2012) John C. Burnett et al.   CHEMISTRY & BIOLOGY

R-loop-mediated genome instability in mRNA cleavage and polyadenylation mutants

(2012) P. C. Stirling et al.   GENES & DEVELOPMENT

R-Loop Formation Is a Distinctive Characteristic of Unmethylated Human CpG Island Promoters

(2012) Paul A. Ginno et al.   MOLECULAR CELL

R Loops: From Transcription Byproducts to Threats to Genome Stability

(2012) Andrés Aguilera et al.   MOLECULAR CELL

Co-transcriptional Assembly of Chemically Modified RNA Nanoparticles Functionalized with siRNAs

(2012) Kirill A. Afonin et al.   NANO LETTERS

A hybrid G-quadruplex structure formed between RNA and DNA explains the extraordinary stability of the mitochondrial R-loop

(2012) P. H. Wanrooij et al.   NUCLEIC ACIDS RESEARCH

Split-protein systems: beyond binary protein–protein interactions

(2011) Sujan S Shekhawat et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Benchmarking a luciferase complementation assay for detecting protein complexes

(2011) Patricia Cassonnet et al.   NATURE METHODS

Challenges and opportunities for structural DNA nanotechnology

(2011) Andre V. Pinheiro et al.   Nature Nanotechnology

Attenuation of loop-receptor interactions with pseudoknot formation

(2011) Kirill A. Afonin et al.   NUCLEIC ACIDS RESEARCH

Subcellular Fate and Off-Target Effects of siRNA, shRNA, and miRNA

(2011) Saurabh Singh et al.   PHARMACEUTICAL RESEARCH

siRNA-Like Double-Stranded RNAs Are Specifically Protected Against Degradation in Human Cell Extract

(2011) John A. H. Hoerter et al.   PLoS One

Structural insights into RNA interference

(2010) Dipali G. Sashital et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Synergistic self-assembly of RNA and DNA molecules

(2010) Seung Hyeon Ko et al.   Nature Chemistry

IFI16 is an innate immune sensor for intracellular DNA

(2010) Leonie Unterholzner et al.   NATURE IMMUNOLOGY

In vitro assembly of cubic RNA-based scaffolds designed in silico

(2010) Kirill A. Afonin et al.   Nature Nanotechnology

The emerging field of RNA nanotechnology

(2010) Peixuan Guo   Nature Nanotechnology

Self-assembly of DNA into nanoscale three-dimensional shapes

(2009) Shawn M. Douglas et al.   NATURE

A three-dimensional view of the molecular machinery of RNA interference

(2009) Martin Jinek et al.   NATURE

TokenRNA: A New Type of Sequence-Specific, Label-Free Fluorescent Biosensor for Folded RNA Molecules

(2008) Kirill A. Afonin et al.   CHEMBIOCHEM

Hierarchical self-assembly of DNA into symmetric supramolecular polyhedra

(2008) Yu He et al.   NATURE

Specific RNA Self-Assembly with Minimal Paranemic Motifs

(2007) Kirill A. Afonin et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY