Attenuation of loop-receptor interactions with pseudoknot formation

RNA molecules with conserved catalytic cores but variable peripheries fold along unique energetically optimized pathways

(2011) S. Mitra et al.   RNA

Emerging Applications of Riboswitches in Chemical Biology

(2010) Shana Topp et al.   ACS Chemical Biology

Nanobiotechnology

(2010) Henry Hess et al.   CURRENT OPINION IN BIOTECHNOLOGY

GNRA/receptor interacting modules: Versatile modular units for natural and artificial RNA architectures

(2010) Junya Ishikawa et al.   METHODS

A polyhedron made of tRNAs

(2010) Isil Severcan et al.   Nature Chemistry

In vitro assembly of cubic RNA-based scaffolds designed in silico

(2010) Kirill A. Afonin et al.   Nature Nanotechnology

Synonymous but not the same: the causes and consequences of codon bias

(2010) Joshua B. Plotkin et al.   NATURE REVIEWS GENETICS

CyloFold: secondary structure prediction including pseudoknots

(2010) E. Bindewald et al.   NUCLEIC ACIDS RESEARCH

Promoting RNA helical stacking via A-minor junctions

(2010) Cody Geary et al.   NUCLEIC ACIDS RESEARCH

Rfam: Wikipedia, clans and the "decimal" release

(2010) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

Riboswitch function: Flipping the switch or tuning the dimmer?

(2010) Nathan J. Baird et al.   RNA Biology

Riboswitch-mediated control of gene expression in eukaryotes

(2010) Andreas Wachter   RNA Biology

Thermodynamic characterization of naturally occurring RNA tetraloops

(2010) J. P. Sheehy et al.   RNA

mRNA Secondary Structures Fold Sequentially But Exchange Rapidly In Vivo

(2010) Elisabeth M. Mahen et al.   PLOS BIOLOGY

Biochemical Features and Functional Implications of the RNA-Based T-Box Regulatory Mechanism

(2009) A. Gutierrez-Preciado et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Recognition of the bacterial second messenger cyclic diguanylate by its cognate riboswitch

(2009) Nadia Kulshina et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Structural basis of ligand binding by a c-di-GMP riboswitch

(2009) Kathryn D Smith et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Tertiary architecture of the Oceanobacillus iheyensis group II intron

(2009) N. Toor et al.   RNA

A widespread riboswitch candidate that controls bacterial genes involved in molybdenum cofactor and tungsten cofactor metabolism

(2008) Elizabeth E. Regulski et al.   MOLECULAR MICROBIOLOGY

The UA_handle: a versatile submotif in stable RNA architectures†

(2008) Luc Jaeger et al.   NUCLEIC ACIDS RESEARCH

Riboswitches in Eubacteria Sense the Second Messenger Cyclic Di-GMP

(2008) N. Sudarsan et al.   SCIENCE

Specific RNA Self-Assembly with Minimal Paranemic Motifs

(2007) Kirill A. Afonin et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY