Genomics of Loa loa, a Wolbachia-free filarial parasite of humans

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Altered Circulating Levels of Matrix Metalloproteinases and Inhibitors Associated with Elevated Type 2 Cytokines in Lymphatic Filarial Disease

(2012) Rajamanickam Anuradha et al.   PLoS Neglected Tropical Diseases

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

(2011) R. Caspi et al.   NUCLEIC ACIDS RESEARCH

Horizontal gene transfer between bacteria and animals

(2011) Julie C. Dunning Hotopp   TRENDS IN GENETICS

Accelerated Profile HMM Searches

(2011) Sean R. Eddy   PLoS Computational Biology

Trehalose extends longevity in the nematode Caenorhabditis elegans

(2010) Yoko Honda et al.   AGING CELL

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Imatinib has a fatal impact on morphology, pairing stability and survival of adult Schistosoma mansoni in vitro

(2010) S. Beckmann et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Lymphatic filariasis and onchocerciasis

(2010) Mark J Taylor et al.   LANCET

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

Piggy-backing the concept of cancer drugs for schistosomiasis treatment: a tangible perspective?

(2010) Colette Dissous et al.   TRENDS IN PARASITOLOGY

A scalable, fully automated process for construction of sequence-ready barcoded libraries for 454

(2010) Niall J Lennon et al.   GENOME BIOLOGY

EFICAz2: enzyme function inference by a combined approach enhanced by machine learning

(2009) Adrian K Arakaki et al.   BMC BIOINFORMATICS

Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology

(2009) P. D. Karp et al.   BRIEFINGS IN BIOINFORMATICS

Neurons Detect Increases and Decreases in Oxygen Levels Using Distinct Guanylate Cyclases

(2009) Manuel Zimmer et al.   NEURON

A Randomized Trial of Doxycycline forMansonella perstansInfection

(2009) Yaya I. Coulibaly et al.   NEW ENGLAND JOURNAL OF MEDICINE

The EGL-4 PKG Acts With KIN-29 Salt-Inducible Kinase and Protein Kinase A to Regulate Chemoreceptor Gene Expression and Sensory Behaviors in Caenorhabditis elegans

(2008) Alexander M. van der Linden et al.   GENETICS

An Improved General Amino Acid Replacement Matrix

(2008) S. Q. Le et al.   MOLECULAR BIOLOGY AND EVOLUTION

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

(2008) Brian J Haas et al.   GENOME BIOLOGY