Integrating Evolutionary and Functional Tests of Adaptive Hypotheses: A Case Study of Altitudinal Differentiation in Hemoglobin Function in an Andean Sparrow, Zonotrichia capensis

Brain transcriptome sequencing and assembly of three songbird model systems for the study of social behavior

(2014) Christopher N. Balakrishnan et al.   PeerJ

Hemoglobin isoform differentiation and allosteric regulation of oxygen binding in the turtle, Trachemys scripta

(2013) Christian Damsgaard et al.   AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY

FUNCTIONAL GENOMICS OF ADAPTATION TO HYPOXIC COLD-STRESS IN HIGH-ALTITUDE DEER MICE: TRANSCRIPTOMIC PLASTICITY AND THERMOGENIC PERFORMANCE

(2013) Zachary A. Cheviron et al.   EVOLUTION

Hemoglobin function and allosteric regulation in semi-fossorial rodents (family Sciuridae) with different altitudinal ranges

(2013) I. G. Revsbech et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Nature's inordinate fondness for metabolic enzymes: why metabolic enzyme loci are so frequently targets of selection

(2013) James H. Marden   MOLECULAR ECOLOGY

The population structure and recent colonization history of Oregon threespine stickleback determined using restriction-site associated DNA-sequencing

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Evolutionary biochemistry: revealing the historical and physical causes of protein properties

(2013) Michael J. Harms et al.   NATURE REVIEWS GENETICS

Repeated elevational transitions in hemoglobin function during the evolution of Andean hummingbirds

(2013) J. Projecto-Garcia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Epistasis Among Adaptive Mutations in Deer Mouse Hemoglobin

(2013) C. Natarajan et al.   SCIENCE

Synthesis of Experimental Molecular Biology and Evolutionary Biology: An Example from the World of Vision

(2012) Shozo Yokoyama   BIOSCIENCE

Gene Duplication and the Evolution of Hemoglobin Isoform Differentiation in Birds

(2012) Michael T. Grispo et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Contributions of phenotypic plasticity to differences in thermogenic performance between highland and lowland deer mice

(2012) Z. A. Cheviron et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Phenotypic plasticity in blood-oxygen transport in highland and lowland deer mice

(2012) D. M. Tufts et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Genome-wide association genetics of an adaptive trait in lodgepole pine

(2012) THOMAS L. PARCHMAN et al.   MOLECULAR ECOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Oxygenation properties and oxidation rates of mouse hemoglobins that differ in reactive cysteine content

(2011) Jay F. Storz et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Differential Loss and Retention of Cytoglobin, Myoglobin, and Globin-E during the Radiation of Vertebrates

(2011) Federico G. Hoffmann et al.   Genome Biology and Evolution

Developmental regulation of hemoglobin synthesis in the green anole lizard Anolis carolinensis

(2011) J. F. Storz et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Elevated performance: the unique physiology of birds that fly at high altitudes

(2011) G. R. Scott   JOURNAL OF EXPERIMENTAL BIOLOGY

Whole-Genome Duplications Spurred the Functional Diversification of the Globin Gene Superfamily in Vertebrates

(2011) Federico G. Hoffmann et al.   MOLECULAR BIOLOGY AND EVOLUTION

Molecular spandrels: tests of adaptation at the genetic level

(2011) Rowan D. H. Barrett et al.   NATURE REVIEWS GENETICS

Expression and Purification of Recombinant Hemoglobin in Escherichia coli

(2011) Chandrasekhar Natarajan et al.   PLoS One

INTEGRATING EVOLUTIONARY AND FUNCTIONAL APPROACHES TO INFER ADAPTATION AT SPECIFIC LOCI

(2010) Jay F. Storz et al.   EVOLUTION

Evolutionary and Functional Properties of a Two-Locus  -Globin Polymorphism in Indian House Mice

(2010) A. M. Runck et al.   GENETICS

Genetic differences in hemoglobin function between highland and lowland deer mice

(2010) J. F. Storz et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Phenotypic plasticity and genetic adaptation to high-altitude hypoxia in vertebrates

(2010) J. F. Storz et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Lineage-Specific Patterns of Functional Diversification in the  - and  -Globin Gene Families of Tetrapod Vertebrates

(2010) F. G. Hoffmann et al.   MOLECULAR BIOLOGY AND EVOLUTION

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

MIGRATION-SELECTION BALANCE AND LOCAL ADAPTATION OF MITOCHONDRIAL HAPLOTYPES IN RUFOUS-COLLARED SPARROWS (ZONOTRICHIA CAPENSIS) ALONG AN ELEVATIONAL GRADIENT

(2009) Zachary A. Cheviron et al.   EVOLUTION

Evolution of Duplicated  -Globin Genes and the Structural Basis of Hemoglobin Isoform Differentiation in Mus

(2009) A. M. Runck et al.   MOLECULAR BIOLOGY AND EVOLUTION

Parallel evolution in the major haemoglobin genes of eight species of Andean waterfowl

(2009) K. G. McCRACKEN et al.   MOLECULAR ECOLOGY

Linking genotypes to phenotypes and fitness: how mechanistic biology can inform molecular ecology

(2009) ANNE C. DALZIEL et al.   MOLECULAR ECOLOGY

Evolutionary and functional insights into the mechanism underlying high-altitude adaptation of deer mouse hemoglobin

(2009) J. F. Storz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanisms of Hemoglobin Adaptation to High Altitude Hypoxia

(2008) Jay F. Storz et al.   HIGH ALTITUDE MEDICINE & BIOLOGY

Transcriptomic variation and plasticity in rufous-collared sparrows (Zonotrichia capensis) along an altitudinal gradient

(2008) ZACHARY A. CHEVIRON et al.   MOLECULAR ECOLOGY