Toward better annotation in plant metabolomics: isolation and structure elucidation of 36 specialized metabolites from Oryza sativa (rice) by using MS/MS and NMR analyses

Phytochemical genomics — a new trend

(2013) Kazuki Saito   CURRENT OPINION IN PLANT BIOLOGY

Structural elucidation of low abundant metabolites in complex sample matrices

(2013) Justin J. J. van der Hooft et al.   Metabolomics

A Novel Integrated Method for Large-Scale Detection, Identification, and Quantification of Widely Targeted Metabolites: Application in the Study of Rice Metabolomics

(2013) Wei Chen et al.   Molecular Plant

LipidBlast in silico tandem mass spectrometry database for lipid identification

(2013) Tobias Kind et al.   NATURE METHODS

Structural analysis and profiling of phenolic secondary metabolites of Mexican lupine species using LC–MS techniques

(2013) Anna Wojakowska et al.   PHYTOCHEMISTRY

PRIMe Update: Innovative Content for Plant Metabolomics and Integration of Gene Expression and Metabolite Accumulation

(2013) Tetsuya Sakurai et al.   PLANT AND CELL PHYSIOLOGY

Metabolite profiling of the short-term responses of rice leaves (Oryza sativa cv. Ilmi) cultivated under different LED lights and its correlations with antioxidant activities

(2013) Eun Sung Jung et al.   PLANT SCIENCE

Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics

(2012) Henning Redestig et al.   BMC Systems Biology

Structural Annotation and Elucidation of Conjugated Phenolic Compounds in Black, Green, and White Tea Extracts

(2012) Justin J. J. van der Hooft et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Mass appeal: metabolite identification in mass spectrometry-focused untargeted metabolomics

(2012) Warwick B. Dunn et al.   Metabolomics

An accelerated workflow for untargeted metabolomics using the METLIN database

(2012) Ralf Tautenhahn et al.   NATURE BIOTECHNOLOGY

RIKEN tandem mass spectral database (ReSpect) for phytochemicals: A plant-specific MS/MS-based data resource and database

(2012) Yuji Sawada et al.   PHYTOCHEMISTRY

Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis

(2012) Fumio Matsuda et al.   PLANT JOURNAL

Genome-Wide Haplotype Changes Produced by Artificial Selection during Modern Rice Breeding in Japan

(2012) Jun-ichi Yonemaru et al.   PLoS One

Metabolomics as a Hypothesis-Generating Functional Genomics Tool for the Annotation of Arabidopsis thaliana Genes of “Unknown Function”

(2012) Stephanie M. Quanbeck et al.   Frontiers in Plant Science

Convergent Evolution in Plant Specialized Metabolism

(2011) Eran Pichersky et al.   Annual Review of Plant Biology

Preparative separation of phenylpropenoid glycerides from the bulbs of Lilium lancifolium by high-speed counter-current chromatography and evaluation of their antioxidant activities

(2011) Jianguang Luo et al.   FOOD CHEMISTRY

Mass Spectrometry Strategies in Metabolomics

(2011) Zhentian Lei et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A genomics and multi-platform metabolomics approach to identify new traits of rice quality in traditional and improved varieties

(2011) M. N. Calingacion et al.   Metabolomics

KNApSAcK Family Databases: Integrated Metabolite–Plant Species Databases for Multifaceted Plant Research

(2011) Farit Mochamad Afendi et al.   PLANT AND CELL PHYSIOLOGY

MassBank: a public repository for sharing mass spectral data for life sciences

(2010) Hisayuki Horai et al.   JOURNAL OF MASS SPECTROMETRY

Regioselective synthesis of di-C-glycosylflavones possessing anti-inflammation activities

(2010) Jiun-Jie Shie et al.   ORGANIC & BIOMOLECULAR CHEMISTRY

PlantMetabolomics.org: A Web Portal for Plant Metabolomics Experiments

(2010) P. Bais et al.   PLANT PHYSIOLOGY

Metabolomics for Functional Genomics, Systems Biology, and Biotechnology

(2009) Kazuki Saito et al.   Annual Review of Plant Biology

Rice-Arabidopsis FOX line screening with FT-NIR-based fingerprinting for GC-TOF/MS-based metabolite profiling

(2009) Makoto Suzuki et al.   Metabolomics

KEGG for representation and analysis of molecular networks involving diseases and drugs

(2009) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Preparative isolation and purification of four flavonoids from the petals ofnelumbo nuciferaby high-speed counter-current chromatography

(2009) Xingfeng Guo et al.   PHYTOCHEMICAL ANALYSIS

Metabolomics-oriented isolation and structure elucidation of 37 compounds including two anthocyanins from Arabidopsis thaliana

(2009) Ryo Nakabayashi et al.   PHYTOCHEMISTRY

Cardiovascular protective flavonolignans and flavonoids from Calamus quiquesetinervius

(2009) Chao-Lin Chang et al.   PHYTOCHEMISTRY

HMDB: a knowledgebase for the human metabolome

(2008) D. S. Wishart et al.   NUCLEIC ACIDS RESEARCH

MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites

(2008) Fumio Matsuda et al.   PLANT JOURNAL

Evaluation of glycosylation and malonylation patterns in flavonoid glycosides during LC/MS/MS metabolite profiling

(2007) P. Kachlicki et al.   JOURNAL OF MASS SPECTROMETRY