Identification and characterization of mRNA-like noncoding RNAs in Salvia miltiorrhiza

Genome-wide characterization and comparative analysis of R2R3-MYB transcription factors shows the complexity of MYB-associated regulatory networks in Salvia miltiorrhiza

(2014) Caili Li et al.   BMC GENOMICS

Combining metabolomics and transcriptomics to characterize tanshinone biosynthesis in Salvia miltiorrhiza

(2014) Wei Gao et al.   BMC GENOMICS

Transcriptional data mining ofSalvia miltiorrhizain response to methyl jasmonate to examine the mechanism of bioactive compound biosynthesis and regulation

(2014) Hongmei Luo et al.   PHYSIOLOGIA PLANTARUM

The Physiological and Biochemical Responses of a Medicinal Plant (Salvia miltiorrhiza L.) to Stress Caused by Various Concentrations of NaCl

(2014) Zhao Gengmao et al.   PLoS One

Identification, Molecular Cloning and Expression Analysis of Five RNA-Dependent RNA Polymerase Genes in Salvia miltiorrhiza

(2014) Fenjuan Shao et al.   PLoS One

PLncDB: plant long non-coding RNA database

(2013) J. Jin et al.   BIOINFORMATICS

Genome-wide identification, molecular cloning, expression profiling and posttranscriptional regulation analysis of the Argonaute gene family in Salvia miltiorrhiza, an emerging model medicinal plant

(2013) Fenjuan Shao et al.   BMC GENOMICS

Arabidopsis Non-Coding RNA Regulation in Abiotic Stress Responses

(2013) Akihiro Matsui et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Genome-wide analysis and molecular dissection of theSPLgene family inSalvia miltiorrhiza

(2013) Linsu Zhang et al.   Journal of Integrative Plant Biology

Pathway engineering for phenolic acid accumulations in Salvia miltiorrhiza by combinational genetic manipulation

(2013) Yuan Zhang et al.   METABOLIC ENGINEERING

Widespread Long Noncoding RNAs as Endogenous Target Mimics for MicroRNAs in Plants

(2013) H.-J. Wu et al.   PLANT PHYSIOLOGY

Comprehensive transcriptome analysis reveals novel genes involved in cardiac glycoside biosynthesis and mlncRNAs associated with secondary metabolism and stress response in Digitalis purpurea

(2012) Bin Wu et al.   BMC GENOMICS

Genome-wide identification and characterization of novel genes involved in terpenoid biosynthesis in Salvia miltiorrhiza

(2012) Yimian Ma et al.   JOURNAL OF EXPERIMENTAL BOTANY

Computational Identification and Functional Predictions of Long Noncoding RNA in Zea mays

(2012) Susan Boerner et al.   PLoS One

Identification and characterization of wheat long non-protein coding RNAs responsive to powdery mildew infection and heat stress by using microarray analysis and SBS sequencing

(2011) Mingming Xin et al.   BMC PLANT BIOLOGY

Extraction, preliminary structural characterization, and antioxidant activities of polysaccharides from Salvia miltiorrhiza Bunge

(2011) Wenlin Wu et al.   CARBOHYDRATE POLYMERS

De novo transcriptome sequencing in Salvia miltiorrhiza to identify genes involved in the biosynthesis of active ingredients

(2011) Hua Wenping et al.   GENOMICS

Computational analysis of miRNA targets in plants: current status and challenges

(2010) X. Dai et al.   BRIEFINGS IN BIOINFORMATICS

Rfam: Wikipedia, clans and the "decimal" release

(2010) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

De novo computational prediction of non-coding RNA genes in prokaryotic genomes

(2009) Thao T. Tran et al.   BIOINFORMATICS

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

Origin, Biogenesis, and Activity of Plant MicroRNAs

(2009) Olivier Voinnet   CELL

Evolution and Functions of Long Noncoding RNAs

(2009) Chris P. Ponting et al.   CELL

Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses

(2008) B. Ben Amor et al.   GENOME RESEARCH

Zm401, a short-open reading-frame mRNA or noncoding RNA, is essential for tapetum and microspore development and can regulate the floret formation in maize

(2008) Jinxia Ma et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

Advancement in analysis of Salviae miltiorrhizae Radix et Rhizoma (Danshen)

(2008) Yong-Guo Li et al.   JOURNAL OF CHROMATOGRAPHY A

Criteria for Annotation of Plant MicroRNAs

(2008) B. C. Meyers et al.   PLANT CELL

Stress-responsive microRNAs inPopulus

(2008) Shanfa Lu et al.   PLANT JOURNAL

Diamonds in the rough: mRNA-like non-coding RNAs

(2008) Linda A. Rymarquis et al.   TRENDS IN PLANT SCIENCE