Digital imaging of root traits (DIRT): a high-throughput computing and collaboration platform for field-based root phenomics
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Digital imaging of root traits (DIRT): a high-throughput computing and collaboration platform for field-based root phenomics
Authors
Keywords
Unify Modeling Language, Root Trait, Content Type, Root System Architecture, Image Mask
Journal
Plant Methods
Volume 11, Issue 1, Pages -
Publisher
Springer Nature
Online
2015-11-02
DOI
10.1186/s13007-015-0093-3
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Regulation of plant root system architecture: implications for crop advancement
- (2015) Eric D Rogers et al. CURRENT OPINION IN BIOTECHNOLOGY
- Measurement of plant growth in view of an integrative analysis of regulatory networks
- (2015) Nathalie Wuyts et al. CURRENT OPINION IN PLANT BIOLOGY
- Lights, camera, action: high-throughput plant phenotyping is ready for a close-up
- (2015) Noah Fahlgren et al. CURRENT OPINION IN PLANT BIOLOGY
- Root phenotyping: from component trait in the lab to breeding: Table 1.
- (2015) René C.P. Kuijken et al. JOURNAL OF EXPERIMENTAL BOTANY
- Next generation shovelomics: set up a tent and REST
- (2015) Tino Colombi et al. PLANT AND SOIL
- Genomic prediction of seedling root length in maize (Zea maysL.)
- (2015) Jordon Pace et al. PLANT JOURNAL
- Rapid phenotyping of crop root systems in undisturbed field soils using X-ray computed tomography
- (2015) Johannes Pfeifer et al. Plant Methods
- Direct comparison of MRI and X-ray CT technologies for 3D imaging of root systems in soil: potential and challenges for root trait quantification
- (2015) Ralf Metzner et al. Plant Methods
- Plant phenotyping: from bean weighing to image analysis
- (2015) Achim Walter et al. Plant Methods
- Automated phenotyping of plant shoots using imaging methods for analysis of plant stress responses – a review
- (2015) Jan F Humplík et al. Plant Methods
- Root System Markup Language: Toward a Unified Root Architecture Description Language
- (2015) Guillaume Lobet et al. PLANT PHYSIOLOGY
- GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems
- (2015) Rubén Rellán-Álvarez et al. eLife
- DynamicRoots: A Software Platform for the Reconstruction and Analysis of Growing Plant Roots
- (2015) Olga Symonova et al. PLoS One
- Image-Based High-Throughput Field Phenotyping of Crop Roots
- (2014) A. Bucksch et al. PLANT PHYSIOLOGY
- Low Crown Root Number Enhances Nitrogen Acquisition from Low-Nitrogen Soils in Maize
- (2014) P. Saengwilai et al. PLANT PHYSIOLOGY
- Future Scenarios for Plant Phenotyping
- (2013) Fabio Fiorani et al. Annual Review of Plant Biology
- An online database for plant image analysis software tools
- (2013) Guillaume Lobet et al. Plant Methods
- RootNav: Navigating Images of Complex Root Architectures
- (2013) M. P. Pound et al. PLANT PHYSIOLOGY
- 3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture
- (2013) C. N. Topp et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Field high-throughput phenotyping: the new crop breeding frontier
- (2013) José Luis Araus et al. TRENDS IN PLANT SCIENCE
- A role for root morphology and related candidate genes in P acquisition efficiency in maize
- (2012) Sylvia Morais de Sousa et al. FUNCTIONAL PLANT BIOLOGY
- High-throughput two-dimensional root system phenotyping platform facilitates genetic analysis of root growth and development
- (2012) RANDY T. CLARK et al. PLANT CELL AND ENVIRONMENT
- Transparent Soil for Imaging the Rhizosphere
- (2012) Helen Downie et al. PLoS One
- The iPlant Collaborative: Cyberinfrastructure to Feed the World
- (2011) Dan Stanzione COMPUTER
- From lab to field, new approaches to phenotyping root system architecture
- (2011) Jinming Zhu et al. CURRENT OPINION IN PLANT BIOLOGY
- Developing X-ray Computed Tomography to non-invasively image 3-D root systems architecture in soil
- (2011) S. J. Mooney et al. PLANT AND SOIL
- Three-Dimensional Root Phenotyping with a Novel Imaging and Software Platform
- (2011) R. T. Clark et al. PLANT PHYSIOLOGY
- Global food demand and the sustainable intensification of agriculture
- (2011) D. Tilman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Shovelomics: high throughput phenotyping of maize (Zea mays L.) root architecture in the field
- (2010) Samuel Trachsel et al. PLANT AND SOIL
- Imaging and Analysis Platform for Automatic Phenotyping and Trait Ranking of Plant Root Systems
- (2010) A. S. Iyer-Pascuzzi et al. PLANT PHYSIOLOGY
- Food Security: The Challenge of Feeding 9 Billion People
- (2010) H. C. J. Godfray et al. SCIENCE
- High throughput phenotyping of root growth dynamics, lateral root formation, root architecture and root hair development enabled by PlaRoM
- (2009) Nima Yazdanbakhsh et al. FUNCTIONAL PLANT BIOLOGY
- Genetic Properties of the Maize Nested Association Mapping Population
- (2009) M. D. McMullen et al. SCIENCE
- With ‘Phenomics,’ Plant Scientists Hope to Shift Breeding Into Overdrive
- (2009) Elizabeth Finkel SCIENCE
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started