Visualizing energy landscapes with metric disconnectivity graphs

Temporal disconnectivity of the energy landscape in glassy systems

(2013) Nikolaos Lempesis et al.   JOURNAL OF CHEMICAL PHYSICS

Demonstrating the Transferability and the Descriptive Power of Sketch-Map

(2013) Michele Ceriotti et al.   Journal of Chemical Theory and Computation

Computational and Experimental Investigations into the Conformations of Cyclic Tetra-α/β-peptides

(2013) Mark T. Oakley et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Construction of the Free Energy Landscape of Peptide Aggregation from Molecular Dynamics Simulations

(2012) Laura Riccardi et al.   Journal of Chemical Theory and Computation

Exploring the Energy Landscapes of Cyclic Tetrapeptides with Discrete Path Sampling

(2012) Mark T. Oakley et al.   Journal of Chemical Theory and Computation

Evolution of the Potential Energy Landscape with Static Pulling Force for Two Model Proteins

(2012) David J. Wales et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Topography of funneled landscapes determines the thermodynamics and kinetics of protein folding

(2012) J. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Determination of reaction coordinates via locally scaled diffusion map

(2011) Mary A. Rohrdanz et al.   JOURNAL OF CHEMICAL PHYSICS

Energy Landscape and Global Optimization for a Frustrated Model Protein

(2011) Mark T. Oakley et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Energy landscapes: some new horizons

(2010) David J Wales   CURRENT OPINION IN STRUCTURAL BIOLOGY

An off-lattice frustrated model protein with a six-stranded β-barrel structure

(2010) Seung-Yeon Kim   JOURNAL OF CHEMICAL PHYSICS

Free energy surfaces from an extended harmonic superposition approach and kinetics for alanine dipeptide

(2008) Birgit Strodel et al.   CHEMICAL PHYSICS LETTERS

Influence of Go-Like Interactions on Global Shapes of Energy Landscapes in β-Barrel Forming Model Proteins:  Inherent Structure Analysis and Statistical Temperature Molecular Dynamics Simulation

(2007) Jaegil Kim et al.   JOURNAL OF PHYSICAL CHEMISTRY B