Spatio-temporal patterning of arginyl-tRNA protein transferase (ATE) contributes to gametophytic development in a moss

TheGreening after Extended Darkness1Is an N-End Rule Pathway Mutant with High Tolerance to Submergence and Starvation

(2015) Willi Riber et al.   PLANT PHYSIOLOGY

Quantitative proteomics analysis of the Arg/N-end rule pathway of targeted degradation in Arabidopsis roots

(2015) Hongtao Zhang et al.   PROTEOMICS

Protein Arginylation, a Global Biological Regulator that Targets Actin Cytoskeleton and the Muscle

(2014) Anna Kashina   Anatomical Record-Advances in Integrative Anatomy and Evolutionary Biology

Arginyltransferase ATE1 Catalyzes Midchain Arginylation of Proteins at Side Chain Carboxylates In Vivo

(2014) Junling Wang et al.   CHEMISTRY & BIOLOGY

Plasma Membrane-Targeted PIN Proteins Drive Shoot Development in a Moss

(2014) Tom A. Bennett et al.   CURRENT BIOLOGY

Targeted Proteomics Analysis of Protein Degradation in Plant Signaling on an LTQ-Orbitrap Mass Spectrometer

(2014) Petra Majovsky et al.   JOURNAL OF PROTEOME RESEARCH

Nitric Oxide Sensing in Plants Is Mediated by Proteolytic Control of Group VII ERF Transcription Factors

(2014) Daniel J. Gibbs et al.   MOLECULAR CELL

Large-scale gene expression profiling data for the model mossPhyscomitrella patensaid understanding of developmental progression, culture and stress conditions

(2014) Manuel Hiss et al.   PLANT JOURNAL

Quantitative Analysis of the Mitochondrial and Plastid Proteomes of the Moss Physcomitrella patens Reveals Protein Macrocompartmentation and Microcompartmentation

(2014) S. J. Mueller et al.   PLANT PHYSIOLOGY

The eukaryotic N-end rule pathway: conserved mechanisms and diverse functions

(2014) Daniel J. Gibbs et al.   TRENDS IN CELL BIOLOGY

Plant cysteine oxidases control the oxygen-dependent branch of the N-end-rule pathway

(2014) Daan A. Weits et al.   Nature Communications

Data access for the 1,000 Plants (1KP) project

(2014) Naim Matasci et al.   GigaScience

The complexity of recognition of ubiquitinated substrates by the 26S proteasome

(2013) Aaron Ciechanover et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions

(2013) Andreas D Zimmer et al.   BMC GENOMICS

The N-Terminal Methionine of Cellular Proteins as a Degradation Signal

(2013) Heon-Ki Kim et al.   CELL

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

An Evolutionarily Conserved Signaling Mechanism Mediates Far-Red Light Responses in Land Plants

(2013) Anja Possart et al.   PLANT CELL

Starch metabolism and antiflorigenic signals modulate the juvenile-to-adult phase transition inArabidopsis

(2013) IANIS G. MATSOUKAS et al.   PLANT CELL AND ENVIRONMENT

High contents of very long-chain polyunsaturated fatty acids in different moss species

(2013) Anna K. Beike et al.   PLANT CELL REPORTS

A single CMT methyltransferase homolog is involved in CHG DNA methylation and development of Physcomitrella patens

(2013) Chen Noy-Malka et al.   PLANT MOLECULAR BIOLOGY

Following Vegetative to Embryonic Cellular Changes in Leaves of Arabidopsis Overexpressing LEAFY COTYLEDON2

(2013) M. Feeney et al.   PLANT PHYSIOLOGY

The Moss Physcomitrella patens Reproductive Organ Development Is Highly Organized, Affected by the Two SHI/STY Genes and by the Level of Active Auxin in the SHI/STY Expression Domain

(2013) K. Landberg et al.   PLANT PHYSIOLOGY

System for Stable β-Estradiol-Inducible Gene Expression in the Moss Physcomitrella patens

(2013) Minoru Kubo et al.   PLoS One

SeqNLS: Nuclear Localization Signal Prediction Based on Frequent Pattern Mining and Linear Motif Scoring

(2013) Jhih-rong Lin et al.   PLoS One

KNOX2 Genes Regulate the Haploid-to-Diploid Morphological Transition in Land Plants

(2013) K. Sakakibara et al.   SCIENCE

Physcomitrella patens: a model for tip cell growth and differentiation

(2012) Luis Vidali et al.   CURRENT OPINION IN PLANT BIOLOGY

Starch turnover: pathways, regulation and role in growth

(2012) Mark Stitt et al.   CURRENT OPINION IN PLANT BIOLOGY

The cyclophilin DIAGEOTROPICA has a conserved role in auxin signaling

(2012) M. Lavy et al.   DEVELOPMENT

New Role for an Old Rule: N-end Rule-Mediated Degradation of Ethylene Responsive Factor Proteins Governs Low Oxygen Response in PlantsF

(2012) Francesco Licausi et al.   Journal of Integrative Plant Biology

Studies ofPhyscomitrella patensreveal that ethylene-mediated submergence responses arose relatively early in land-plant evolution

(2012) Yuki Yasumura et al.   PLANT JOURNAL

Arginyltransferase Is an ATP-Independent Self-Regulating Enzyme that Forms Distinct Functional Complexes In Vivo

(2011) Junling Wang et al.   CHEMISTRY & BIOLOGY

Posttranslational arginylation as a global biological regulator

(2011) Sougata Saha et al.   DEVELOPMENTAL BIOLOGY

Oxygen sensing in plants is mediated by an N-end rule pathway for protein destabilization

(2011) Francesco Licausi et al.   NATURE

Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants

(2011) Daniel J. Gibbs et al.   NATURE

Metabolite profiling of the moss Physcomitrella patens reveals evolutionary conservation of osmoprotective substances

(2011) Anika Erxleben et al.   PLANT CELL REPORTS

The N-end rule pathway and regulation by proteolysis

(2011) Alexander Varshavsky   PROTEIN SCIENCE

Accelerated Profile HMM Searches

(2011) Sean R. Eddy   PLoS Computational Biology

Physcomitrella patens Auxin-Resistant Mutants Affect Conserved Elements of an Auxin-Signaling Pathway

(2010) Michael J. Prigge et al.   CURRENT BIOLOGY

The ubiquitin-proteasome system regulates plant hormone signaling

(2010) Aaron Santner et al.   PLANT JOURNAL

MicroRNA534a control of BLADE-ON-PETIOLE 1 and 2 mediates juvenile-to-adult gametophyte transition in Physcomitrella patens

(2010) Omar Saleh et al.   PLANT JOURNAL

The plant N-end rule pathway: structure and functions

(2010) Emmanuelle Graciet et al.   TRENDS IN PLANT SCIENCE

NLStradamus: a simple Hidden Markov Model for nuclear localization signal prediction

(2009) Alex N Nguyen Ba et al.   BMC BIOINFORMATICS

Local Cues and Asymmetric Cell Divisions Underpin Body Plan Transitions in the Moss Physcomitrella patens

(2009) C. Jill Harrison et al.   CURRENT BIOLOGY

Regulation of stem cell maintenance by the Polycomb protein FIE has been conserved during land plant evolution

(2009) A. Mosquna et al.   DEVELOPMENT

Sucrose non-fermenting kinase 1 (SnRK1) coordinates metabolic and hormonal signals during pea cotyledon growth and differentiation

(2009) Ruslana Radchuk et al.   PLANT JOURNAL

SnRK1 (SNF1-related kinase 1) has a central role in sugar and ABA signalling inArabidopsis thaliana

(2009) Mathieu Jossier et al.   PLANT JOURNAL

Structure and evolutionary conservation of the plant N-end rule pathway

(2009) Emmanuelle Graciet et al.   PLANT JOURNAL

Oil Bodies and Oleosins in Physcomitrella Possess Characteristics Representative of Early Trends in Evolution

(2009) C.-Y. Huang et al.   PLANT PHYSIOLOGY

The N-end rule pathway promotes seed germination and establishment through removal of ABA sensitivity in Arabidopsis

(2009) T. J. Holman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The N-end rule pathway controls multiple functions during Arabidopsis shoot and leaf development

(2009) E. Graciet et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Class 1 KNOX genes are not involved in shoot development in the mossPhyscomitrella patensbut do function in sporophyte development

(2008) Keiko Sakakibara et al.   EVOLUTION & DEVELOPMENT

BRICK1 Is Required for Apical Cell Growth in Filaments of the Moss Physcomitrella patens but Not for Gametophore Morphology

(2008) P.-F. Perroud et al.   PLANT CELL

Exploring plant biodiversity: the Physcomitrella genome and beyond

(2008) Daniel Lang et al.   TRENDS IN PLANT SCIENCE

The knock-out of ARP3a gene affects F-actin cytoskeleton organization altering cellular tip growth, morphology and development in mossPhyscomitrella patens

(2008) Andrija Finka et al.   CELL MOTILITY AND THE CYTOSKELETON