The interplay between nucleoid organization and transcription in archaeal genomes

Genomic Looping: A Key Principle of Chromatin Organization

(2015) Ramon A. van der Valk et al.   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

Nucleosome organization in the vicinity of transcription factor binding sites in the human genome

(2014) Yumin Nie et al.   BMC GENOMICS

Lysine Methylation Mapping of Crenarchaeal DNA-Directed RNA Polymerases by Collision-Induced and Electron-Transfer Dissociation Mass Spectrometry

(2014) Mikel Azkargorta et al.   JOURNAL OF PROTEOME RESEARCH

The yeast prefoldin-like URI-orthologue Bud27 associates with the RSC nucleosome remodeler and modulates transcription

(2014) María Carmen Mirón-García et al.   NUCLEIC ACIDS RESEARCH

Nuclear functions of prefoldin

(2014) G. Millan-Zambrano et al.   Open Biology

Cis-regulatory logic in archaeal transcription

(2013) Eveline Peeters et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Archaeal nucleosome positioning in vivo and in vitro is directed by primary sequence motifs

(2013) Narasimharao Nalabothula et al.   BMC GENOMICS

Mechanisms and Functions of ATP-Dependent Chromatin-Remodeling Enzymes

(2013) Geeta J. Narlikar et al.   CELL

CTCF and Cohesin: Linking Gene Regulatory Elements with Their Targets

(2013) Matthias Merkenschlager et al.   CELL

Genome Architecture: Domain Organization of Interphase Chromosomes

(2013) Wendy A. Bickmore et al.   CELL

Transcription Factories: Genome Organization and Gene Regulation

(2013) Argyris Papantonis et al.   CHEMICAL REVIEWS

An alternative beads-on-a-string chromatin architecture in Thermococcus kodakarensis

(2013) Hugo Maruyama et al.   EMBO REPORTS

Lrs14 transcriptional regulators influence biofilm formation and cell motility of Crenarchaea

(2013) Alvaro Orell et al.   ISME Journal

The Sulfolobus Initiator Element Is an Important Contributor to Promoter Strength

(2013) X. Ao et al.   JOURNAL OF BACTERIOLOGY

A Prototypic Lysine Methyltransferase 4 from Archaea with Degenerate Sequence Specificity Methylates Chromatin Proteins Sul7d and Cren7 in Different Patterns

(2013) Yanling Niu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Archaeal Signal Transduction: Impact of Protein Phosphatase Deletions on Cell Size, Motility, and Energy Metabolism inSulfolobus acidocaldarius

(2013) Julia Reimann et al.   MOLECULAR & CELLULAR PROTEOMICS

Nucleosome Free Regions in Yeast Promoters Result from Competitive Binding of Transcription Factors That Interact with Chromatin Modifiers

(2013) Evgeniy A. Ozonov et al.   PLoS Computational Biology

The Prefoldin Complex Regulates Chromatin Dynamics during Transcription Elongation

(2013) Gonzalo Millán-Zambrano et al.   PLoS Genetics

An Archaeal Histone Is Required for Transformation of Thermococcus kodakarensis

(2012) L. Cubonova et al.   JOURNAL OF BACTERIOLOGY

Activation of Archaeal Transcription Mediated by Recruitment of Transcription Factor B

(2012) Simon M. Ochs et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Crystal Structure of Archaeal Chromatin Protein Alba2-Double-stranded DNA Complex from Aeropyrum pernix K1

(2012) Tomoyuki Tanaka et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A Nexus for Gene Expression—Molecular Mechanisms of Spt5 and NusG in the Three Domains of Life

(2012) Finn Werner   JOURNAL OF MOLECULAR BIOLOGY

Regulation of archaella expression by the FHA and von Willebrand domain-containing proteins ArnA and ArnB inSulfolobus acidocaldarius

(2012) Julia Reimann et al.   MOLECULAR MICROBIOLOGY

Alba shapes the archaeal genome using a delicate balance of bridging and stiffening the DNA

(2012) Niels Laurens et al.   Nature Communications

Chromatin is an ancient innovation conserved between Archaea and Eukarya

(2012) Ron Ammar et al.   eLife

Sa-Lrp fromSulfolobus acidocaldariusis a versatile, glutamine-responsive, and architectural transcriptional regulator

(2012) Amelia Vassart et al.   MicrobiologyOpen

Nucleoid-associated proteins in Crenarchaea

(2011) Rosalie P.C. Driessen et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Regulation of chromatin by histone modifications

(2011) Andrew J Bannister et al.   CELL RESEARCH

Recent advances in the understanding of archaeal transcription

(2011) Dina Grohmann et al.   CURRENT OPINION IN MICROBIOLOGY

Architecture of the RNA polymerase-Spt4/5 complex and basis of universal transcription processivity

(2011) Fuensanta W Martinez-Rucobo et al.   EMBO JOURNAL

The Initiation Factor TFE and the Elongation Factor Spt4/5 Compete for the RNAP Clamp during Transcription Initiation and Elongation

(2011) Dina Grohmann et al.   MOLECULAR CELL

Evolution of multisubunit RNA polymerases in the three domains of life

(2011) Finn Werner et al.   NATURE REVIEWS MICROBIOLOGY

The DNA-recognition fold of Sso7c4 suggests a new member of SpoVT-AbrB superfamily from archaea

(2011) Chun-Hua Hsu et al.   NUCLEIC ACIDS RESEARCH

Transcriptional control by two leucine-responsive regulatory proteins in Halobacterium salinarum R1

(2010) Rita Schwaiger et al.   BMC MOLECULAR BIOLOGY

Identification and Genomic Analysis of Transcription Factors in Archaeal Genomes Exemplifies Their Functional Architecture and Evolutionary Origin

(2010) E. Perez-Rueda et al.   MOLECULAR BIOLOGY AND EVOLUTION

Histone and TK0471/TrmBL2 form a novel heterogeneous genome architecture in the hyperthermophilic archaeon Thermococcus kodakarensis

(2010) Hugo Maruyama et al.   MOLECULAR BIOLOGY OF THE CELL

Genomic repertoires of DNA-binding transcription factors across the tree of life

(2010) Varodom Charoensawan et al.   NUCLEIC ACIDS RESEARCH

Spt4/5 stimulates transcription elongation through the RNA polymerase clamp coiled-coil motif

(2010) Angela Hirtreiter et al.   NUCLEIC ACIDS RESEARCH

Transcriptional activation in the context of repression mediated by archaeal histones

(2010) S. P. Wilkinson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Lrp Family of Transcription Regulators in Archaea

(2010) Eveline Peeters et al.   ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL

Extensive Lysine Methylation in Hyperthermophilic Crenarchaea: Potential Implications for Protein Stability and Recombinant Enzymes

(2010) Catherine H. Botting et al.   ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL

A single-base resolution map of an archaeal transcriptome

(2009) O. Wurtzel et al.   GENOME RESEARCH

The Sac10b Homolog in Methanococcus maripaludis Binds DNA at Specific Sites

(2009) Y. Liu et al.   JOURNAL OF BACTERIOLOGY

The role of TrmB and TrmB-like transcriptional regulators for sugar transport and metabolism in the hyperthermophilic archaeon Pyrococcus furiosus

(2008) Sung-Jae Lee et al.   ARCHIVES OF MICROBIOLOGY

SurR: a transcriptional activator and repressor controlling hydrogen and elemental sulphur metabolism inPyrococcus furiosus

(2008) Gina L. Lipscomb et al.   MOLECULAR MICROBIOLOGY

Ss-LrpB, a transcriptional regulator fromSulfolobus solfataricus, regulates a gene cluster with a pyruvate ferredoxin oxidoreductase-encoding operon and permease genes

(2008) Eveline Peeters et al.   MOLECULAR MICROBIOLOGY