Archaeal nucleosome positioning in vivo and in vitro is directed by primary sequence motifs

An Archaeal Histone Is Required for Transformation of Thermococcus kodakarensis

(2012) L. Cubonova et al.   JOURNAL OF BACTERIOLOGY

Characteristics of nucleosomes and linker DNA regions on the genome of the basidiomycete Mixia osmundae revealed by mono- and dinucleosome mapping

(2012) H. Nishida et al.   Open Biology

Controls of Nucleosome Positioning in the Human Genome

(2012) Daniel J. Gaffney et al.   PLoS Genetics

Chromatin is an ancient innovation conserved between Archaea and Eukarya

(2012) Ron Ammar et al.   eLife

Nucleosome-coupled expression differences in closely-related species

(2011) Yuanfang Guan et al.   BMC GENOMICS

Recent advances in the understanding of archaeal transcription

(2011) Dina Grohmann et al.   CURRENT OPINION IN MICROBIOLOGY

“Anticipated” nucleosome positioning pattern in prokaryotes

(2011) Alexandra E. Rapoport et al.   GENE

Variety of genomic DNA patterns for nucleosome positioning

(2011) I. Ioshikhes et al.   GENOME RESEARCH

Nucleosome sequence preferences influence in vivo nucleosome organization

(2010) Noam Kaplan et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The Complete Genome Sequence of Haloferax volcanii DS2, a Model Archaeon

(2010) Amber L. Hartman et al.   PLoS One

Transcriptional activation in the context of repression mediated by archaeal histones

(2010) S. P. Wilkinson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Poly(dA:dT) tracts: major determinants of nucleosome organization

(2009) Eran Segal et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Gene expression divergence in yeast is coupled to evolution of DNA-encoded nucleosome organization

(2009) Yair Field et al.   NATURE GENETICS

Single-molecule imaging of DNA curtains reveals intrinsic energy landscapes for nucleosome deposition

(2009) Mari-Liis Visnapuu et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo

(2009) Yong Zhang et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Nanoarchaeal Origin of Histone H3?

(2008) Ulrike Friedrich-Jahn et al.   JOURNAL OF BACTERIOLOGY

Polarity in Archaeal Operon Transcription in Thermococcus kodakaraensis

(2008) T. J. Santangelo et al.   JOURNAL OF BACTERIOLOGY

Nucleosome organization in the Drosophila genome

(2008) Travis N. Mavrich et al.   NATURE

The DNA-encoded nucleosome organization of a eukaryotic genome

(2008) Noam Kaplan et al.   NATURE

Genomic Sequence Is Highly Predictive of Local Nucleosome Depletion

(2008) Guo-Cheng Yuan et al.   PLoS Computational Biology

Dynamic Remodeling of Individual Nucleosomes Across a Eukaryotic Genome in Response to Transcriptional Perturbation

(2008) Sushma Shivaswamy et al.   PLOS BIOLOGY

Predicting Human Nucleosome Occupancy from Primary Sequence

(2008) Shobhit Gupta et al.   PLoS Computational Biology

Distinct Modes of Regulation by Chromatin Encoded through Nucleosome Positioning Signals

(2008) Yair Field et al.   PLoS Computational Biology