Genomic repertoires of DNA-binding transcription factors across the tree of life

wDBTF: an integrated database resource for studying wheat transcription factor families

(2010) Isabelle Romeuf et al.   BMC GENOMICS

SoyDB: a knowledge database of soybean transcription factors

(2010) Zheng Wang et al.   BMC PLANT BIOLOGY

Lineage-specific expansion of DNA-binding transcription factor families

(2010) Varodom Charoensawan et al.   TRENDS IN GENETICS

Infrastructure for the life sciences: design and implementation of the UniProt website

(2009) Eric Jain et al.   BMC BIOINFORMATICS

A census of human transcription factors: function, expression and evolution

(2009) Juan M. Vaquerizas et al.   NATURE REVIEWS GENETICS

FlyTF: improved annotation and enhanced functionality of the Drosophila transcription factor database

(2009) Ulrike Pfreundt et al.   NUCLEIC ACIDS RESEARCH

JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles

(2009) Elodie Portales-Casamar et al.   NUCLEIC ACIDS RESEARCH

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

(2009) Konstantinos Liolios et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Toolbox model of evolution of prokaryotic metabolic networks and their regulation

(2009) S. Maslov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

TFCat: the curated catalog of mouse and human transcription factors

(2009) Debra L Fulton et al.   GENOME BIOLOGY

ITFP: an integrated platform of mammalian transcription factors

(2008) G. Zheng et al.   BIOINFORMATICS

FTFD: an informatics pipeline supporting phylogenomic analysis of fungal transcription factors

(2008) J. Park et al.   BIOINFORMATICS

TOBFAC: the database of tobacco transcription factors

(2008) Paul J Rushton et al.   BMC BIOINFORMATICS

Transcription factors in fungi

(2008) Ekaterina Shelest   FEMS MICROBIOLOGY LETTERS

How much non-coding DNA do eukaryotes require?

(2008) Sebastian E. Ahnert et al.   JOURNAL OF THEORETICAL BIOLOGY

Data Deposition and Annotation at the Worldwide Protein Data Bank

(2008) Shuchismita Dutta et al.   MOLECULAR BIOTECHNOLOGY

Genomics of bacteria and archaea: the emerging dynamic view of the prokaryotic world

(2008) E. V. Koonin et al.   NUCLEIC ACIDS RESEARCH

SUPERFAMILY—sophisticated comparative genomics, data mining, visualization and phylogeny

(2008) Derek Wilson et al.   NUCLEIC ACIDS RESEARCH

PRODORIC (release 2009): a database and tool platform for the analysis of gene regulation in prokaryotes

(2008) A. Grote et al.   NUCLEIC ACIDS RESEARCH

FlyBase: enhancing Drosophila Gene Ontology annotations

(2008) S. Tweedie et al.   NUCLEIC ACIDS RESEARCH

ArchaeaTF: An integrated database of putative transcription factors in Archaea

(2007) Jinyu Wu et al.   GENOMICS

Comparative genomics of transcription factors and chromatin proteins in parasitic protists and other eukaryotes

(2007) Lakshminarayan M. Iyer et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY