Quorum sensing and biofilm formation in mycobacteria: Role of c-di-GMP and methods to study this second messenger

Characterization of a dual-active enzyme, DcpA, involved in cyclic diguanosine monophosphate turnover in Mycobacterium smegmatis

(2014) I. M. Sharma et al.   MICROBIOLOGY-SGM

A cyclic dinucleotide containing 2-aminopurine is a general fluorescent sensor for c-di-GMP and 3′,3′-cGAMP

(2014) Benjamin T. Roembke et al.   Molecular BioSystems

Near-infrared Light Responsive Synthetic c-di-GMP Module for Optogenetic Applications

(2014) Min-Hyung Ryu et al.   ACS Synthetic Biology

Biofilm Formation byMycobacterium bovis: Influence of Surface Kind and Temperatures of Sanitizer Treatments on Biofilm Control

(2014) Victoria O. Adetunji et al.   Biomed Research International

High-Throughput Screening Using the Differential Radial Capillary Action of Ligand Assay Identifies Ebselen As an Inhibitor of Diguanylate Cyclases

(2013) Ori J. Lieberman et al.   ACS Chemical Biology

Pili contribute to biofilm formation in vitro in Mycobacterium tuberculosis

(2013) Saiyur Ramsugit et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Identification and characterization of starvation induced msdgc-1 promoter involved in the c-di-GMP turnover

(2013) Binod K. Bharati et al.   GENE

Visualizing the Perturbation of Cellular Cyclic di-GMP Levels in Bacterial Cells

(2013) Chun Loong Ho et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Cyclic di-GMP: the First 25 Years of a Universal Bacterial Second Messenger

(2013) U. Romling et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Probing the activity of diguanylate cyclases and c-di-GMP phosphodiesterases in real-time by CD spectroscopy

(2013) Valentina Stelitano et al.   NUCLEIC ACIDS RESEARCH

Systematic identification of conserved bacterial c-di-AMP receptor proteins

(2013) R. M. Corrigan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cyclic di-GMP mediates Mycobacterium tuberculosis dormancy and pathogenecity

(2013) Yuzhi Hong et al.   TUBERCULOSIS

Engineered Allosteric Ribozymes That Sense the Bacterial Second Messenger Cyclic Diguanosyl 5′-Monophosphate

(2012) Hongzhou Gu et al.   ANALYTICAL CHEMISTRY

Identification of Small Molecules That Antagonize Diguanylate Cyclase Enzymes To Inhibit Biofilm Formation

(2012) Karthik Sambanthamoorthy et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Fluorescence-Based Reporter for Gauging Cyclic Di-GMP Levels in Pseudomonas aeruginosa

(2012) Morten T. Rybtke et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Synthesis and Characterization of a Fluorescent Analogue of Cyclic di-GMP

(2012) Indra Mani Sharma et al.   BIOCHEMISTRY

Quorum sensing inhibitors: An overview

(2012) Vipin Chandra Kalia   BIOTECHNOLOGY ADVANCES

Quorum-sensing regulates biofilm formation in Vibrio scophthalmi

(2012) Cristina García-Aljaro et al.   BMC MICROBIOLOGY

Nucleotide, c-di-GMP, c-di-AMP, cGMP, cAMP, (p)ppGpp signaling in bacteria and implications in pathogenesis

(2012) Dimpy Kalia et al.   CHEMICAL SOCIETY REVIEWS

Targeting drug tolerance in mycobacteria: a perspective from mycobacterial biofilms

(2012) Mohammad S Islam et al.   Expert Review of Anti-Infective Therapy

A full-length bifunctional protein involved in c-di-GMP turnover is required for long-term survival under nutrient starvation in Mycobacterium smegmatis

(2012) B. K. Bharati et al.   MICROBIOLOGY-SGM

A C-di-GMP–proflavine–hemin supramolecular complex has peroxidase activity—implication for a simple colorimetric detection

(2012) Shizuka Nakayama et al.   Molecular BioSystems

A Novel Two-Component System PdeK/PdeR Regulates c-di-GMP Turnover and Virulence ofXanthomonas oryzaepv.oryzae

(2012) Fenghuan Yang et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

The prokaryote messenger c-di-GMP triggers stalk cell differentiation in Dictyostelium

(2012) Zhi-hui Chen et al.   NATURE

Infectious disease: TB's revenge

(2012) Leigh Phillips   NATURE

ppGpp: magic beyond RNA polymerase

(2012) Zachary D. Dalebroux et al.   NATURE REVIEWS MICROBIOLOGY

A rapid assay for affinity and kinetics of molecular interactions with nucleic acids

(2012) Gregory P. Donaldson et al.   NUCLEIC ACIDS RESEARCH

LtmA, a novel cyclic di-GMP-responsive activator, broadly regulates the expression of lipid transport and metabolism genes in Mycobacterium smegmatis

(2012) Weihui Li et al.   NUCLEIC ACIDS RESEARCH

Rational Design of Fluorescent Biosensor for Cyclic di-GMP

(2011) Chun Loong Ho et al.   CHEMBIOCHEM

Integration of Cyclic di-GMP and Quorum Sensing in the Control of vpsT and aphA in Vibrio cholerae

(2011) Disha Srivastava et al.   JOURNAL OF BACTERIOLOGY

The Polyketide Pks1 Contributes to Biofilm Formation in Mycobacterium tuberculosis

(2011) J. M. Pang et al.   JOURNAL OF BACTERIOLOGY

Role and regulation of bacterial LuxR-like regulators

(2011) Jing Chen et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

A chemical proteomics approach to identify c-di-GMP binding proteins in Pseudomonas aeruginosa

(2011) Juliane Düvel et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Thiazole Orange-Induced c-di-GMP Quadruplex Formation Facilitates a Simple Fluorescent Detection of This Ubiquitous Biofilm Regulating Molecule

(2011) Shizuka Nakayama et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Conservative Change to the Phosphate Moiety of Cyclic Diguanylic Monophosphate Remarkably Affects Its Polymorphism and Ability To Bind DGC, PDE, and PilZ Proteins

(2011) Jingxin Wang et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Differential radial capillary action of ligand assay for high-throughput detection of protein-metabolite interactions

(2011) K. G. Roelofs et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Efficient Enzymatic Production of the Bacterial Second Messenger c-di-GMP by the Diguanylate Cyclase YdeH from E. coli

(2010) Franziska Zähringer et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Mycobacterial Biofilms Facilitate Horizontal DNA Transfer between Strains of Mycobacterium smegmatis

(2010) K. T. Nguyen et al.   JOURNAL OF BACTERIOLOGY

Enzymatic Hydrolysis of Trehalose Dimycolate Releases Free Mycolic Acids during Mycobacterial Growth in Biofilms

(2010) Anil K. Ojha et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Identification, Activity and Disulfide Connectivity of C-di-GMP Regulating Proteins in Mycobacterium tuberculosis

(2010) Kajal Gupta et al.   PLoS One

Asymmetrical Distribution of the Second Messenger c-di-GMP upon Bacterial Cell Division

(2010) M. Christen et al.   SCIENCE

Enzymatic synthesis of c-di-GMP using a thermophilic diguanylate cyclase

(2009) Feng Rao et al.   ANALYTICAL BIOCHEMISTRY

Monitoring of diguanylate cyclase activity and of cyclic-di-GMP biosynthesis by whole-cell assays suitable for high-throughput screening of biofilm inhibitors

(2009) Davide Antoniani et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Molecular oxygen regulates the enzymatic activity of a heme-containing diguanylate cyclase (HemDGC) for the synthesis of cyclic di-GMP

(2009) Hitomi Sawai et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Uncovering new signaling proteins and potential drug targets through the interactome analysis of Mycobacterium tuberculosis

(2009) Tao Cui et al.   BMC GENOMICS

Biofilm formation by Mycobacterium avium isolates originating from humans, swine and birds

(2009) Tone Johansen et al.   BMC MICROBIOLOGY

Trends in tuberculosis incidence and their determinants in 134 countries

(2009) C Dye et al.   BULLETIN OF THE WORLD HEALTH ORGANIZATION

The Functional Role of a Conserved Loop in EAL Domain-Based Cyclic di-GMP-Specific Phosphodiesterase

(2009) F. Rao et al.   JOURNAL OF BACTERIOLOGY

Mycobacterium abscessus Glycopeptidolipids Mask Underlying Cell Wall Phosphatidyl-myo-Inositol Mannosides Blocking Induction of Human Macrophage TNF-  by Preventing Interaction with TLR2

(2009) E. R. Rhoades et al.   JOURNAL OF IMMUNOLOGY

Structure-Based Design of DevR Inhibitor Active against NonreplicatingMycobacterium tuberculosis

(2009) Rajesh Kumar Gupta et al.   JOURNAL OF MEDICINAL CHEMISTRY

Determinants for the Activation and Autoinhibition of the Diguanylate Cyclase Response Regulator WspR

(2009) Nabanita De et al.   JOURNAL OF MOLECULAR BIOLOGY

Co-regulation ofXanthomonas campestrisvirulence by quorum sensing and a novel two-component regulatory system RavS/RavR

(2009) Ya-Wen He et al.   MOLECULAR MICROBIOLOGY

Principles of c-di-GMP signalling in bacteria

(2009) Regine Hengge   NATURE REVIEWS MICROBIOLOGY

Connecting Quorum Sensing, c-di-GMP, Pel Polysaccharide, and Biofilm Formation in Pseudomonas aeruginosa through Tyrosine Phosphatase TpbA (PA3885)

(2009) Akihiro Ueda et al.   PLoS Pathogens

Quantitative determination of cyclic diguanosine monophosphate concentrations in nucleotide extracts of bacteria by matrix-assisted laser desorption/ionization–time-of-flight mass spectrometry

(2008) Roger Simm et al.   ANALYTICAL BIOCHEMISTRY

Quorum Sensing Controls Biofilm Formation in Vibrio cholerae through Modulation of Cyclic Di-GMP Levels and Repression of vpsT

(2008) C. M. Waters et al.   JOURNAL OF BACTERIOLOGY

Growth ofMycobacterium tuberculosisbiofilms containing free mycolic acids and harbouring drug-tolerant bacteria

(2008) Anil K. Ojha et al.   MOLECULAR MICROBIOLOGY

Phosphorylation-Independent Regulation of the Diguanylate Cyclase WspR

(2008) Nabanita De et al.   PLOS BIOLOGY