A C-di-GMP–proflavine–hemin supramolecular complex has peroxidase activity—implication for a simple colorimetric detection

Observation of Water Molecules within the Bimolecular d(G3CT4G3C)2G-Quadruplex

(2011) Jaka Zavasnik et al.   BIOCHEMISTRY

c-di-GMP can form remarkably stable G-quadruplexes at physiological conditions in the presence of some planar intercalators

(2011) Shizuka Nakayama et al.   CHEMICAL COMMUNICATIONS

Harnessing Nature’s Insights: Synthetic Small Molecules with Peroxidase-Mimicking DNAzyme Properties

(2011) Loic Stefan et al.   CHEMISTRY-A EUROPEAN JOURNAL

DNA-Based Peroxidation Catalyst-What Is the Exact Role of Topology on Catalysis and Is There a Special Binding Site for Catalysis?

(2011) Shizuka Nakayama et al.   CHEMISTRY-A EUROPEAN JOURNAL

Thiazole Orange-Induced c-di-GMP Quadruplex Formation Facilitates a Simple Fluorescent Detection of This Ubiquitous Biofilm Regulating Molecule

(2011) Shizuka Nakayama et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis

(2011) Marcos V. A. S. Navarro et al.   PLOS BIOLOGY

‘Turn-on’ detection of Hg2+ ion using a peroxidase-like split G-quadruplex–hemin DNAzyme

(2010) De-Ming Kong et al.   ANALYST

Label-Free Colorimetric Assay for Methyltransferase Activity Based on a Novel Methylation-Responsive DNAzyme Strategy

(2010) Wang Li et al.   ANALYTICAL CHEMISTRY

Identification and Characterization of a Phosphodiesterase That Inversely Regulates Motility and Biofilm Formation in Vibrio cholerae

(2010) X. Liu et al.   JOURNAL OF BACTERIOLOGY

Supramolecular and Chemical Cascade Approaches to Molecular Sensing

(2010) Eric V. Anslyn   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

A Lead(II)-Driven DNA Molecular Device for Turn-On Fluorescence Detection of Lead(II) Ion with High Selectivity and Sensitivity

(2010) Tao Li et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Characterization of a diguanylate cyclase from Shewanella woodyi with cyclase and phosphodiesterase activities

(2010) Niu Liu et al.   Molecular BioSystems

Asymmetrical Distribution of the Second Messenger c-di-GMP upon Bacterial Cell Division

(2010) M. Christen et al.   SCIENCE

Vibrio cholerae VpsT Regulates Matrix Production and Motility by Directly Sensing Cyclic di-GMP

(2010) P. V. Krasteva et al.   SCIENCE

Bioinspired Colorimetric Detection of Calcium(II) Ions in Serum Using Calsequestrin-Functionalized Gold Nanoparticles

(2009) Sunghyun Kim et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

General Peroxidase Activity of G-Quadruplex−Hemin Complexes and Its Application in Ligand Screening

(2009) Xiaohong Cheng et al.   BIOCHEMISTRY

An Allosteric Dual-DNAzyme Unimolecular Probe for Colorimetric Detection of Copper(II)

(2009) Bin-Cheng Yin et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Colorimetric Split G-Quadruplex Probes for Nucleic Acid Sensing: Improving Reconstituted DNAzyme’s Catalytic Efficiency via Probe Remodeling

(2009) Shizuka Nakayama et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Biomolecule detection with peroxidase-mimicking DNAzymes; expanding detection modality with fluorogenic compounds

(2009) Shizuka Nakayama et al.   Molecular BioSystems

Transition state analogs of 5′-methylthioadenosine nucleosidase disrupt quorum sensing

(2009) Jemy A Gutierrez et al.   Nature Chemical Biology

Minimal nucleotide duplex formation in water through enclathration in self-assembled hosts

(2009) Tomohisa Sawada et al.   Nature Chemistry

Principles of c-di-GMP signalling in bacteria

(2009) Regine Hengge   NATURE REVIEWS MICROBIOLOGY

Pseudomonas aeruginosa PAO1 Preferentially Grows as Aggregates in Liquid Batch Cultures and Disperses upon Starvation

(2009) David Schleheck et al.   PLoS One

Connecting Quorum Sensing, c-di-GMP, Pel Polysaccharide, and Biofilm Formation in Pseudomonas aeruginosa through Tyrosine Phosphatase TpbA (PA3885)

(2009) Akihiro Ueda et al.   PLoS Pathogens

Quantitative determination of cyclic diguanosine monophosphate concentrations in nucleotide extracts of bacteria by matrix-assisted laser desorption/ionization–time-of-flight mass spectrometry

(2008) Roger Simm et al.   ANALYTICAL BIOCHEMISTRY

Quorum Sensing Controls Biofilm Formation in Vibrio cholerae through Modulation of Cyclic Di-GMP Levels and Repression of vpsT

(2008) C. M. Waters et al.   JOURNAL OF BACTERIOLOGY

Highly Effective Colorimetric and Visual Detection of Nucleic Acids Using an Asymmetrically Split Peroxidase DNAzyme

(2008) Minggang Deng et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Identification of FleQ fromPseudomonas aeruginosaas a c-di-GMP-responsive transcription factor

(2008) Jason W. Hickman et al.   MOLECULAR MICROBIOLOGY