Catchment-scale biogeography of riverine bacterioplankton

Metapopulation persistence and species spread in river networks

(2014) Lorenzo Mari et al.   ECOLOGY LETTERS

Identifying priorities for nutrient mitigation using river concentration–flow relationships: The Thames basin, UK

(2014) Michael J. Bowes et al.   JOURNAL OF HYDROLOGY

Weekly flow cytometric analysis of riverine phytoplankton to determine seasonal bloom dynamics

(2014) Daniel. S. Read et al.   Environmental Science-Processes & Impacts

Diversity in riverine metacommunities: a network perspective

(2013) Florian Altermatt   AQUATIC ECOLOGY

Bacterial diversity in a large, temperate, heavily modified river, as determined by pyrosequencing

(2013) GE Schultz Jr et al.   AQUATIC MICROBIAL ECOLOGY

Denitrification in a large river: consideration of geomorphic controls on microbial activity and community structure

(2013) Corianne Tatariw et al.   ECOLOGY

Determining indicator taxa across spatial and seasonal gradients in the Columbia River coastal margin

(2013) Caroline S Fortunato et al.   ISME Journal

Application of Illumina next-generation sequencing to characterize the bacterial community of the Upper Mississippi River

(2013) C. Staley et al.   JOURNAL OF APPLIED MICROBIOLOGY

River network properties shape α-diversity and community similarity patterns of aquatic insect communities across major drainage basins

(2013) Florian Altermatt et al.   JOURNAL OF BIOGEOGRAPHY

A Microbial Signature Approach to Identify Fecal Pollution in the Waters Off an Urbanized Coast of Lake Michigan

(2013) Ryan J. Newton et al.   MICROBIAL ECOLOGY

Patterns and Processes of Microbial Community Assembly

(2013) D. R. Nemergut et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Global carbon dioxide emissions from inland waters

(2013) Peter A. Raymond et al.   NATURE

A cost-effectiveness analysis of water security and water quality: impacts of climate and land-use change on the River Thames system

(2013) P. G. Whitehead et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

Using Boreholes as Windows into Groundwater Ecosystems

(2013) James P. R. Sorensen et al.   PLoS One

Microbiome of the upper troposphere: Species composition and prevalence, effects of tropical storms, and atmospheric implications

(2013) N. DeLeon-Rodriguez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Response of bacterial communities to environmental changes in a mesoscale subtropical watershed, Southeast China

(2013) Anyi Hu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Grassland management influences spatial patterns of soil microbial communities

(2013) Emma J. Sayer et al.   SOIL BIOLOGY & BIOCHEMISTRY

The role of aquatic ecosystems as reservoirs of antibiotic resistance

(2013) Elisabet Marti et al.   TRENDS IN MICROBIOLOGY

Quantitative multi-year elucidation of fecal sources of waterborne pathogen contamination in the South Nation River basin using Bacteroidales microbial source tracking markers

(2013) Romain Marti et al.   WATER RESEARCH

Turnover of soil bacterial diversity driven by wide-scale environmental heterogeneity

(2013) L. Ranjard et al.   Nature Communications

Dissolved Organic Carbon Influences Microbial Community Composition and Diversity in Managed Aquifer Recharge Systems

(2012) Dong Li et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Community analysis of high- and low-nucleic acid-containing bacteria in NW Mediterranean coastal waters using 16S rDNA pyrosequencing

(2012) Maria Vila-Costa et al.   ENVIRONMENTAL MICROBIOLOGY

In situ substrate preferences of abundant bacterioplankton populations in a prealpine freshwater lake

(2012) Michaela M Salcher et al.   ISME Journal

Microbial diversity in arctic freshwaters is structured by inoculation of microbes from soils

(2012) Byron C Crump et al.   ISME Journal

Fast, accurate error-correction of amplicon pyrosequences using Acacia

(2012) Lauren Bragg et al.   NATURE METHODS

Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom

(2012) H. Teeling et al.   SCIENCE

Spatial and temporal changes in chlorophyll-a concentrations in the River Thames basin, UK: Are phosphorus concentrations beginning to limit phytoplankton biomass?

(2012) M.J. Bowes et al.   SCIENCE OF THE TOTAL ENVIRONMENT

The bacterial biogeography of British soils

(2011) Robert I. Griffiths et al.   ENVIRONMENTAL MICROBIOLOGY

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

(2011) B. J. Haas et al.   GENOME RESEARCH

Lowland river water quality: a new UK data resource for process and environmental management analysis

(2011) Colin Neal et al.   HYDROLOGICAL PROCESSES

Freshwater bacterioplankton richness in oligotrophic lakes depends on nutrient availability rather than on species–area relationships

(2011) Jürg Brendan Logue et al.   ISME Journal

Temporal variation of β-diversity and assembly mechanisms in a bacterial metacommunity

(2011) Silke Langenheder et al.   ISME Journal

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

A Guide to the Natural History of Freshwater Lake Bacteria

(2011) R. J. Newton et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Significant efflux of carbon dioxide from streams and rivers in the United States

(2011) David Butman et al.   Nature Geoscience

Phylogenetic characterisation of picoplanktonic populations with high and low nucleic acid content in the North Atlantic Ocean

(2011) Martha Schattenhofer et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Separation of river network-scale nitrogen removal among the main channel and two transient storage compartments

(2011) Robert J. Stewart et al.   WATER RESOURCES RESEARCH

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Relative independence of organic carbon transport and processing in a large temperate river: The Hudson River as both pipe and reactor

(2010) Paul A. del Giorgio et al.   LIMNOLOGY AND OCEANOGRAPHY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Evidence for structuring of bacterial community composition by organic carbon source in temperate lakes

(2009) Stuart E. Jones et al.   ENVIRONMENTAL MICROBIOLOGY

Resolving Genetic Functions within Microbial Populations: In Situ Analyses Using rRNA and mRNA Stable Isotope Probing Coupled with Single-Cell Raman-Fluorescence In Situ Hybridization

(2008) W. E. Huang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Untangling the complex issue of dissolved organic carbon uptake: a stable isotope approach

(2008) LOUIS A. KAPLAN et al.   FRESHWATER BIOLOGY

Neutral metacommunity models predict fish diversity patterns in Mississippi–Missouri basin

(2008) Rachata Muneepeerakul et al.   NATURE

Ubiquity of Biological Ice Nucleators in Snowfall

(2008) B. C. Christner et al.   SCIENCE