Reconstructing an ancestral genotype of two hexachlorocyclohexane-degrading Sphingobium species using metagenomic sequence data
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Title
Reconstructing an ancestral genotype of two hexachlorocyclohexane-degrading Sphingobium species using metagenomic sequence data
Authors
Keywords
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Journal
ISME Journal
Volume 8, Issue 2, Pages 398-408
Publisher
Springer Nature
Online
2013-09-12
DOI
10.1038/ismej.2013.153
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Related references
Note: Only part of the references are listed.- Genome Sequence of Sphingobium indicum B90A, a Hexachlorocyclohexane-Degrading Bacterium
- (2012) S. Anand et al. JOURNAL OF BACTERIOLOGY
- MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads
- (2012) Toshiaki Namiki et al. NUCLEIC ACIDS RESEARCH
- Comparative Metagenomic Analysis of Soil Microbial Communities across Three Hexachlorocyclohexane Contamination Levels
- (2012) Naseer Sangwan et al. PLoS One
- Soil Bacterial Diversity Screening Using Single 16S rRNA Gene V Regions Coupled with Multi-Million Read Generating Sequencing Technologies
- (2012) Sotirios Vasileiadis et al. PLoS One
- Comparative Metagenomics of Toxic Freshwater Cyanobacteria Bloom Communities on Two Continents
- (2012) Morgan M. Steffen et al. PLoS One
- Bambus 2: scaffolding metagenomes
- (2011) Sergey Koren et al. BIOINFORMATICS
- ThelinGenes for γ-Hexachlorocyclohexane Degradation inSphingomonassp. MM-1 Proved to Be Dispersed across Multiple Plasmids
- (2011) Michiro TABATA et al. BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY
- Bacterial species may exist, metagenomics reveal
- (2011) Alejandro Caro-Quintero et al. ENVIRONMENTAL MICROBIOLOGY
- Genomic organization and genomic structural rearrangements of Sphingobium japonicum UT26, an archetypal γ-hexachlorocyclohexane-degrading bacterium
- (2011) Yuji Nagata et al. ENZYME AND MICROBIAL TECHNOLOGY
- The Whole Genome Sequence of Sphingobium chlorophenolicum L-1: Insights into the Evolution of the Pentachlorophenol Degradation Pathway
- (2011) Shelley D. Copley et al. Genome Biology and Evolution
- Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a Degrader of Lignin-Derived Biaryls and Monoaryls
- (2011) E. Masai et al. JOURNAL OF BACTERIOLOGY
- Selection in Coastal Synechococcus (Cyanobacteria) Populations Evaluated from Environmental Metagenomes
- (2011) Vera Tai et al. PLoS One
- SeqTrim: a high-throughput pipeline for preprocessing any type of sequence reads
- (2010) Juan Falgueras et al. BMC BIOINFORMATICS
- Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data
- (2010) Petr Novák et al. BMC BIOINFORMATICS
- Evaluation of hexachlorocyclohexane contamination from the last lindane production plant operating in India
- (2010) Simran Jit et al. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH
- Complete Genome Sequence of the Representative -Hexachlorocyclohexane-Degrading Bacterium Sphingobium japonicum UT26
- (2010) Y. Nagata et al. JOURNAL OF BACTERIOLOGY
- Biochemistry of Microbial Degradation of Hexachlorocyclohexane and Prospects for Bioremediation
- (2010) R. Lal et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Transposases are the most abundant, most ubiquitous genes in nature
- (2010) Ramy K. Aziz et al. NUCLEIC ACIDS RESEARCH
- Murasaki: A Fast, Parallelizable Algorithm to Find Anchors from Multiple Genomes
- (2010) Kris Popendorf et al. PLoS One
- Accurate identification of orthologous segments among multiple genomes
- (2009) Tsuyoshi Hachiya et al. BIOINFORMATICS
- INTEGRALL: a database and search engine for integrons, integrases and gene cassettes
- (2009) A. Moura et al. BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- ABySS: A parallel assembler for short read sequence data
- (2009) J. T. Simpson et al. GENOME RESEARCH
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