Selection in Coastal Synechococcus (Cyanobacteria) Populations Evaluated from Environmental Metagenomes

Microarray-Based Evaluation of Whole-Community Genome DNA Amplification Methods

(2011) Jian Wang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metagenomic potential of microbial assemblages in the surface waters of the central Pacific Ocean tracks variability in oceanic habitat

(2011) Ian Hewson et al.   LIMNOLOGY AND OCEANOGRAPHY

Coastal Strains of Marine Synechococcus Species Exhibit Increased Tolerance to Copper Shock and a Distinctive Transcriptional Response Relative to Those of Open-Ocean Strains

(2009) R. K. Stuart et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparative Metagenomic Analysis of a Microbial Community Residing at a Depth of 4,000 Meters at Station ALOHA in the North Pacific Subtropical Gyre

(2009) K. T. Konstantinidis et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Horizontal gene transfer of zinc and non-zinc forms of bacterial ribosomal protein S4

(2009) Ke Chen et al.   BMC EVOLUTIONARY BIOLOGY

Intertwined Evolutionary Histories of Marine Synechococcus and Prochlorococcus marinus

(2009) Olga Zhaxybayeva et al.   Genome Biology and Evolution

Temporal variation of Synechococcus clades at a coastal Pacific Ocean monitoring site

(2009) Vera Tai et al.   ISME Journal

Microarray analysis of phosphate regulation in the marine cyanobacterium Synechococcus sp. WH8102

(2009) Sasha G Tetu et al.   ISME Journal

Systematic artifacts in metagenomes from complex microbial communities

(2009) Vicente Gomez-Alvarez et al.   ISME Journal

Whole Genome Amplification and De novo Assembly of Single Bacterial Cells

(2009) Sébastien Rodrigue et al.   PLoS One

Quantifying environmental adaptation of metabolic pathways in metagenomics

(2009) T. A. Gianoulis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evaluation of next generation sequencing platforms for population targeted sequencing studies

(2009) Olivier Harismendy et al.   GENOME BIOLOGY

CoastalSynechococcusmetagenome reveals major roles for horizontal gene transfer and plasmids in population diversity

(2008) B. Palenik et al.   ENVIRONMENTAL MICROBIOLOGY

Trends in Prokaryotic Evolution Revealed by Comparison of Closely Related Bacterial and Archaeal Genomes

(2008) P. S. Novichkov et al.   JOURNAL OF BACTERIOLOGY

Environmental Sequence Data from the Sargasso Sea Reveal That the Characteristics of Genome Reduction in Prochlorococcus Are Not a Harbinger for an Escalation in Genetic Drift

(2008) J. Hu et al.   MOLECULAR BIOLOGY AND EVOLUTION

MetaSim—A Sequencing Simulator for Genomics and Metagenomics

(2008) Daniel C. Richter et al.   PLoS One

Population Genomic Analysis of Strain Variation in Leptospirillum Group II Bacteria Involved in Acid Mine Drainage Formation

(2008) Sheri L Simmons et al.   PLOS BIOLOGY

Unravelling the genomic mosaic of a ubiquitous genus of marine cyanobacteria

(2008) Alexis Dufresne et al.   GENOME BIOLOGY

A Competition Mechanism Regulates the Translation of the Escherichia coli Operon Encoding Ribosomal Proteins L35 and L20

(2007) Julie Haentjens-Sitri et al.   JOURNAL OF MOLECULAR BIOLOGY