Large-scale development of expressed sequence tag-derived simple sequence repeat markers by deep transcriptome sequencing in garlic (Allium sativum L.)

Integrated transcriptome catalogue and organ-specific profiling of gene expression in fertile garlic (Allium sativum L.)

(2015) Rina Kamenetsky et al.   BMC GENOMICS

The first Illumina-based de novo transcriptome sequencing and analysis of pumpkin (Cucurbita moschata Duch.) and SSR marker development

(2014) Tingquan Wu et al.   MOLECULAR BREEDING

Large-scale development of EST-SSR markers in sponge gourd via transcriptome sequencing

(2014) Hai-Bin Wu et al.   MOLECULAR BREEDING

Characterization and cross-species transferability of EST–SSR markers developed from the transcriptome of Dysosma versipellis (Berberidaceae) and their application to population genetic studies

(2014) Rui Guo et al.   MOLECULAR BREEDING

Diversity Analysis in Cannabis sativa Based on Large-Scale Development of Expressed Sequence Tag-Derived Simple Sequence Repeat Markers

(2014) Chunsheng Gao et al.   PLoS One

De novo assembly and characterization of transcriptome using Illumina paired-end sequencing and identification of CesA gene in ramie (Boehmeria nivea L. Gaud)

(2013) Touming Liu et al.   BMC GENOMICS

Development of microsatellite markers by transcriptome sequencing in two species of Amorphophallus (Araceae)

(2013) Xingfei Zheng et al.   BMC GENOMICS

Novel and useful genic-SSR markers from de novo transcriptome sequencing of radish (Raphanus sativus L.)

(2013) Lulu Zhai et al.   MOLECULAR BREEDING

Development and Characterization of 1,827 Expressed Sequence Tag-Derived Simple Sequence Repeat Markers for Ramie (Boehmeria nivea L. Gaud)

(2013) Touming Liu et al.   PLoS One

Next-Generation Sequencing of the Chrysanthemum nankingense (Asteraceae) Transcriptome Permits Large-Scale Unigene Assembly and SSR Marker Discovery

(2013) Haibin Wang et al.   PLoS One

De novo assembly and characterization of the garlic (Allium sativum) bud transcriptome by Illumina sequencing

(2012) Xiudong Sun et al.   PLANT CELL REPORTS

Male gametogenesis and sterility in garlic (Allium sativum L.): barriers on the way to fertilization and seed production

(2012) Einat Shemesh Mayer et al.   PLANTA

Transcriptome Sequencing and Comparative Analysis of Saccharina japonica (Laminariales, Phaeophyceae) under Blue Light Induction

(2012) Yunyan Deng et al.   PLoS One

New microsatellite markers for garlic, Allium sativum (Alliaceae)

(2011) Camila P. Cunha et al.   AMERICAN JOURNAL OF BOTANY

De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas)

(2011) Zhangying Wang et al.   BMC GENOMICS

Quantitative trait loci for the number of grains per panicle dependent on or independent of heading date in rice (Oryza sativa L.)

(2011) Touming Liu et al.   BREEDING SCIENCE

De Novo Assembly of Chickpea Transcriptome Using Short Reads for Gene Discovery and Marker Identification

(2011) R. Garg et al.   DNA RESEARCH

Comparison of quantitative trait loci for rice yield, panicle length and spikelet density across three connected populations

(2011) TOUMING LIU et al.   JOURNAL OF GENETICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Flower development in garlic: the ups and downs of gaLFY expression

(2011) Rotem Neta et al.   PLANTA

Cross-amplification of SSR markers developed from Allium sativum to other Allium species

(2011) Gi-An Lee et al.   SCIENTIA HORTICULTURAE

Genetic dissection of rice grain shape using a recombinant inbred line population derived from two contrasting parents and fine mapping a pleiotropic quantitative trait locus qGL7

(2010) Xufeng Bai et al.   BMC GENETICS

Development of a EST dataset and characterization of EST-SSRs in a traditional Chinese medicinal plant, Epimedium sagittatum (Sieb. Et Zucc.) Maxim

(2010) Shaohua Zeng et al.   BMC GENOMICS

Isolation and characteristics of eight novel polymorphic microsatellite loci from the genome of garlic (Allium sativum L.)

(2009) Kyung-Ho Ma et al.   SCIENTIA HORTICULTURAE

Sequencing, Mapping, and Analysis of 27,455 Maize Full-Length cDNAs

(2009) Carol Soderlund et al.   PLoS Genetics

Transferability of the EST-SSRs developed on Nules clementine (Citrus clementina Hort ex Tan) to other Citrus species and their effectiveness for genetic mapping

(2008) François L Luro et al.   BMC GENOMICS

Insights into corn genes derived from large-scale cDNA sequencing

(2008) Nickolai N. Alexandrov et al.   PLANT MOLECULAR BIOLOGY