De Novo Assembly of Chickpea Transcriptome Using Short Reads for Gene Discovery and Marker Identification

Validation of internal control genes for quantitative gene expression studies in chickpea (Cicer arietinum L.)

(2010) Rohini Garg et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Comparative analyses reveal distinct sets of lineage-specific genes within Arabidopsis thaliana

(2010) Haining Lin et al.   BMC EVOLUTIONARY BIOLOGY

Development of a EST dataset and characterization of EST-SSRs in a traditional Chinese medicinal plant, Epimedium sagittatum (Sieb. Et Zucc.) Maxim

(2010) Shaohua Zeng et al.   BMC GENOMICS

The first set of EST resource for gene discovery and marker development in pigeonpea (Cajanus cajan L.)

(2010) Nikku L Raju et al.   BMC PLANT BIOLOGY

Analysis of gene expression in response to water deficit of chickpea (Cicer arietinum L.) varieties differing in drought tolerance

(2010) Deepti Jain et al.   BMC PLANT BIOLOGY

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

Applications of New Sequencing Technologies for Transcriptome Analysis

(2009) Olena Morozova et al.   Annual Review of Genomics and Human Genetics

De novo transcriptome assembly with ABySS

(2009) I. Birol et al.   BIOINFORMATICS

Comparative analyses of genotype dependent expressed sequence tags and stress-responsive transcriptome of chickpea wilt illustrates predicted and unexpected genes and novel regulators of plant immunity

(2009) Nasheeman Ashraf et al.   BMC GENOMICS

A comprehensive resource of drought- and salinity- responsive ESTs for gene discovery and marker development in chickpea (Cicer arietinum L.)

(2009) Rajeev K Varshney et al.   BMC GENOMICS

ABySS: A parallel assembler for short read sequence data

(2009) J. T. Simpson et al.   GENOME RESEARCH

Benchmarking Next-Generation Transcriptome Sequencing for Functional and Evolutionary Genomics

(2009) J. G. Gibbons et al.   MOLECULAR BIOLOGY AND EVOLUTION

CIPK6, a CBL-interacting protein kinase is required for development and salt tolerance in plants

(2009) Vineeta Tripathi et al.   PLANT JOURNAL

Three Sequenced Legume Genomes and Many Crop Species: Rich Opportunities for Translational Genomics

(2009) S. B. Cannon et al.   PLANT PHYSIOLOGY

Legume Transcription Factor Genes: What Makes Legumes So Special?

(2009) M. Libault et al.   PLANT PHYSIOLOGY

Comparative analysis of ESTs in response to drought stress in chickpea (C. arietinum L.)

(2008) Wen-Rui Gao et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

SuperSAGE: the drought stress-responsive transcriptome of chickpea roots

(2008) Carlos Molina et al.   BMC GENOMICS

Genome Structure of the Legume, Lotus japonicus

(2008) S. Sato et al.   DNA RESEARCH

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing

(2008) J. CRISTOBAL VERA et al.   MOLECULAR ECOLOGY

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS