Sequential Window Acquisition of all Theoretical Mass Spectra (SWATH) Analysis for Characterization and Quantification of Histone Post-translational Modifications

Evaluation of Proteomic Search Engines for the Analysis of Histone Modifications

(2014) Zuo-Fei Yuan et al.   JOURNAL OF PROTEOME RESEARCH

OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data

(2014) Hannes L Röst et al.   NATURE BIOTECHNOLOGY

Middle-down hybrid chromatography/tandem mass spectrometry workflow for characterization of combinatorial post-translational modifications in histones

(2014) Simone Sidoli et al.   PROTEOMICS

Quantitative measurements ofN-linked glycoproteins in human plasma by SWATH-MS

(2013) Yansheng Liu et al.   PROTEOMICS

Proteomics in chromatin biology and epigenetics: Elucidation of post-translational modifications of histone proteins by mass spectrometry

(2012) Simone Sidoli et al.   Journal of Proteomics

Selected reaction monitoring–based proteomics: workflows, potential, pitfalls and future directions

(2012) Paola Picotti et al.   NATURE METHODS

Chromatin replication and epigenome maintenance

(2012) Constance Alabert et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Enhanced top-down characterization of histone post-translational modifications

(2012) Zhixin Tian et al.   GENOME BIOLOGY

High-resolution mass spectrometry for integrated qualitative and quantitative analysis of pharmaceuticals in biological matrices

(2011) Gérard Hopfgartner et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

mProphet: automated data processing and statistical validation for large-scale SRM experiments

(2011) Lukas Reiter et al.   NATURE METHODS

Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

(2010) Brendan MacLean et al.   BIOINFORMATICS

Covalent modifications of histones during mitosis and meiosis

(2010) Dazhong Xu et al.   CELL CYCLE

Multiple Epigenetic Modifiers Induce Aggressive Viral Extinction in Extraembryonic Endoderm Stem Cells

(2010) Michael C. Golding et al.   Cell Stem Cell

The significance, development and progress of high-throughput combinatorial histone code analysis

(2010) Nicolas L. Young et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Epigenetic modifications and human disease

(2010) Anna Portela et al.   NATURE BIOTECHNOLOGY

Options and considerations when selecting a quantitative proteomics strategy

(2010) Bruno Domon et al.   NATURE BIOTECHNOLOGY

Efficient readout of posttranslational codes on the 50-residue tail of histone H3 by high-resolution MS/MS

(2009) Nertila Siuti et al.   ANALYTICAL BIOCHEMISTRY

Antipsychotic Treatment Alters Protein Expression Associated with Presynaptic Function and Nervous System Development in Rat Frontal Cortex

(2009) Dan Ma et al.   JOURNAL OF PROTEOME RESEARCH

One-Pot Shotgun Quantitative Mass Spectrometry Characterization of Histones

(2009) Mariana D. Plazas-Mayorca et al.   JOURNAL OF PROTEOME RESEARCH

High Throughput Characterization of Combinatorial Histone Codes

(2009) Nicolas L. Young et al.   MOLECULAR & CELLULAR PROTEOMICS