Genome-wide methylation profiling in Crohnʼs disease identifies altered epigenetic regulation of key host defense mechanisms including the Th17 pathway

The epigenetics of autoimmunity

(2011) Francesca Meda et al.   Cellular & Molecular Immunology

NOD2 regulation of micrornas

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CD44 Reciprocally Regulates the Differentiation of Encephalitogenic Th1/Th17 and Th2/Regulatory T Cells through Epigenetic Modulation Involving DNA Methylation of Cytokine Gene Promoters, Thereby Controlling the Development of Experimental Autoimmune Encephalomyelitis

(2011) H. Guan et al.   JOURNAL OF IMMUNOLOGY

Differential patterns of histone acetylation in inflammatory bowel diseases

(2011) Loukia G Tsaprouni et al.   Journal of Inflammation-London

A synonymous variant in IRGM alters a binding site for miR-196 and causes deregulation of IRGM-dependent xenophagy in Crohn's disease

(2011) Patrick Brest et al.   NATURE GENETICS

Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47

(2011) Carl A Anderson et al.   NATURE GENETICS

Identification of an innate T helper type 17 response to intestinal bacterial pathogens

(2011) Kaoru Geddes et al.   NATURE MEDICINE

Epigenetic alterations in autoimmune rheumatic diseases

(2011) Esteban Ballestar   Nature Reviews Rheumatology

Identification of disease-associated DNA methylation in intestinal tissues from patients with inflammatory bowel disease

(2010) Z Lin et al.   CLINICAL GENETICS

The role of mucosal immunity and host genetics in defining intestinal commensal bacteria

(2010) Jonathan Hansen et al.   CURRENT OPINION IN GASTROENTEROLOGY

Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci

(2010) Andre Franke et al.   NATURE GENETICS

DNMT3AMutations in Acute Myeloid Leukemia

(2010) Timothy J. Ley et al.   NEW ENGLAND JOURNAL OF MEDICINE

Translational Selection Is Ubiquitous in Prokaryotes

(2010) Fran Supek et al.   PLoS Genetics

Epigenetic Epidemiology of Common Complex Disease: Prospects for Prediction, Prevention, and Treatment

(2010) Caroline L. Relton et al.   PLOS MEDICINE

The Genetics of Crohn's Disease

(2009) Johan Van Limbergen et al.   Annual Review of Genomics and Human Genetics

GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

(2009) Eran Eden et al.   BMC BIOINFORMATICS

Epigenetics in cancer

(2009) S. Sharma et al.   CARCINOGENESIS

Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus

(2009) B. M. Javierre et al.   GENOME RESEARCH

Effect of MDR1 gene promoter methylation in patients with ulcerative colitis

(2009) Tahara   INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE

Common variants at five new loci associated with early-onset inflammatory bowel disease

(2009) Marcin Imielinski et al.   NATURE GENETICS

DNA methylation profiles in monozygotic and dizygotic twins

(2009) Zachary A Kaminsky et al.   NATURE GENETICS

lumi: a pipeline for processing Illumina microarray

(2008) P. Du et al.   BIOINFORMATICS

CMA – a comprehensive Bioconductor package for supervised classification with high dimensional data

(2008) M Slawski et al.   BMC BIOINFORMATICS

Replication of signals from recent studies of Crohn's disease identifies previously unknown disease loci for ulcerative colitis

(2008) Andre Franke et al.   NATURE GENETICS