Microbial interactions within the plant holobiont

Fungal networks shape dynamics of bacterial dispersal and community assembly in cheese rind microbiomes

(2018) Yuanchen Zhang et al.   Nature Communications

Protists are an integral part of the Arabidopsis thaliana microbiome

(2017) Melanie Sapp et al.   ENVIRONMENTAL MICROBIOLOGY

Grazing of leaf-associated Cercomonads (Protists: Rhizaria: Cercozoa) structures bacterial community composition and function

(2017) Sebastian Flues et al.   ENVIRONMENTAL MICROBIOLOGY

Root-associated fungal microbiota of nonmycorrhizalArabis alpinaand its contribution to plant phosphorus nutrition

(2017) Juliana Almario et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Simplified and representative bacterial community of maize roots

(2017) Ben Niu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Disentangling Interactions in the Microbiome: A Network Perspective

(2017) Mehdi Layeghifard et al.   TRENDS IN MICROBIOLOGY

The Ecological Role of Volatile and Soluble Secondary Metabolites Produced by Soil Bacteria

(2017) Olaf Tyc et al.   TRENDS IN MICROBIOLOGY

Evolutionary conservation of a core root microbiome across plant phyla along a tropical soil chronosequence

(2017) Yun Kit Yeoh et al.   Nature Communications

Facilitation of phosphorus uptake in maize plants by mycorrhizosphere bacteria

(2017) Fabio Battini et al.   Scientific Reports

Spatiotemporal Variation and Networks in the Mycobiome of the Wheat Canopy

(2017) Rumakanta Sapkota et al.   Frontiers in Plant Science

Ecophylogeny of the endospheric root fungal microbiome of co-occurring Agrostis stolonifera

(2017) Amandine Lê Van et al.   PeerJ

Tomato root microbiota and Phytophthora parasitica-associated disease

(2017) Marie Larousse et al.   Microbiome

Mycelium-Like Networks Increase Bacterial Dispersal, Growth, and Biodegradation in a Model Ecosystem at Various Water Potentials

(2016) Anja Worrich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Isolation of Endohyphal Bacteria from Foliar Ascomycota andIn VitroEstablishment of Their Symbiotic Associations

(2016) Kayla R. Arendt et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The type three secretion system facilitates migration of Burkholderia terrae BS001 in the mycosphere of two soil-borne fungi

(2016) Pu Yang et al.   BIOLOGY AND FERTILITY OF SOILS

Root Endophyte Colletotrichum tofieldiae Confers Plant Fitness Benefits that Are Phosphate Status Dependent

(2016) Kei Hiruma et al.   CELL

Network-based metabolic analysis and microbial community modeling

(2016) Cesar Cardona et al.   CURRENT OPINION IN MICROBIOLOGY

Beyond the Black Queen Hypothesis

(2016) Alix Mas et al.   ISME Journal

Root microbiota dynamics of perennial Arabis alpina are dependent on soil residence time but independent of flowering time

(2016) Nina Dombrowski et al.   ISME Journal

The prey’s scent – Volatile organic compound mediated interactions between soil bacteria and their protist predators

(2016) Kristin Schulz-Bohm et al.   ISME Journal

High Diversity Revealed in Leaf-Associated Protists (Rhizaria: Cercozoa) of Brassicaceae

(2016) Sebastian Ploch et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Network modules and hubs in plant-root fungal biomes

(2016) Hirokazu Toju et al.   Journal of the Royal Society Interface

Phyllosphere Fungal Communities Differentiate More Thoroughly than Bacterial Communities Along an Elevation Gradient

(2016) Corinne Vacher et al.   MICROBIAL ECOLOGY

Deciphering the Pathobiome: Intra- and Interkingdom Interactions Involving the Pathogen Erysiphe alphitoides

(2016) Boris Jakuschkin et al.   MICROBIAL ECOLOGY

Plant microbiota affects seed transmission of phytopathogenic microorganisms

(2016) Matthieu Barret et al.   MOLECULAR PLANT PATHOLOGY

Temporal changes of bacterial communities in the Tuber melanosporum ectomycorrhizosphere during ascocarp development

(2016) Aurélie Deveau et al.   MYCORRHIZA

Dimensions of biodiversity in the Earth mycobiome

(2016) Kabir G. Peay et al.   NATURE REVIEWS MICROBIOLOGY

The microbiome of the leaf surface of Arabidopsis protects against a fungal pathogen

(2016) Unyarat Ritpitakphong et al.   NEW PHYTOLOGIST

Microbiome Networks: A Systems Framework for Identifying Candidate Microbial Assemblages for Disease Management

(2016) R. Poudel et al.   PHYTOPATHOLOGY

Impact of Bacterial–Fungal Interactions on the Colonization of the Endosphere

(2016) Leonard S. van Overbeek et al.   TRENDS IN PLANT SCIENCE

Microbes Drive Evolution of Animals and Plants: the Hologenome Concept

(2016) Eugene Rosenberg et al.   mBio

Host genotype and age shape the leaf and root microbiomes of a wild perennial plant

(2016) Maggie R. Wagner et al.   Nature Communications

Mycelia as a focal point for horizontal gene transfer among soil bacteria

(2016) Tom Berthold et al.   Scientific Reports

Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation

(2016) Matthew T. Agler et al.   PLOS BIOLOGY

Microbial Small Talk: Volatiles in Fungal–Bacterial Interactions

(2016) Ruth Schmidt et al.   Frontiers in Microbiology

Differences in stability of seed-associated microbial assemblages in response to invasion by phytopathogenic microorganisms

(2016) Samir Rezki et al.   PeerJ

Root-hair endophyte stacking in finger millet creates a physicochemical barrier to trap the fungal pathogen Fusarium graminearum

(2016) Walaa K. Mousa et al.   Nature Microbiology

Roots Shaping Their Microbiome: Global Hotspots for Microbial Activity

(2015) Barbara Reinhold-Hurek et al.   Annual Review of Phytopathology

Exploring the genomic traits of fungus-feeding bacterial genus Collimonas

(2015) Chunxu Song et al.   BMC GENOMICS

Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley

(2015) Davide Bulgarelli et al.   Cell Host & Microbe

Microbiota and Host Nutrition across Plant and Animal Kingdoms

(2015) Stéphane Hacquard et al.   Cell Host & Microbe

The local environment determines the assembly of root endophytic fungi at a continental scale

(2015) Kyriaki Glynou et al.   ENVIRONMENTAL MICROBIOLOGY

Antagonistic interactions between endophytic cultivable bacterial communities isolated from the medicinal plant E chinacea purpurea

(2015) Isabel Maida et al.   ENVIRONMENTAL MICROBIOLOGY

Analysis of single root tip microbiomes suggests that distinctive bacterial communities are selected by P inus sylvestris roots colonized by different ectomycorrhizal fungi

(2015) Srisailam Marupakula et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial and biochemical basis of a Fusarium wilt-suppressive soil

(2015) Jae-Yul Cha et al.   ISME Journal

Stability and succession of the rhizosphere microbiota depends upon plant type and soil composition

(2015) Andrzej Tkacz et al.   ISME Journal

Fungal invasion of the rhizosphere microbiome

(2015) Emilie Chapelle et al.   ISME Journal

Non-pathogenic Rhizobium radiobacter F4 deploys plant beneficial activity independent of its host Piriformospora indica

(2015) Stefanie P Glaeser et al.   ISME Journal

A widespread plant-fungal-bacterial symbiosis promotes plant biodiversity, plant nutrition and seedling recruitment

(2015) Marcel GA van der Heijden et al.   ISME Journal

An improved high throughput sequencing method for studying oomycete communities

(2015) Rumakanta Sapkota et al.   JOURNAL OF MICROBIOLOGICAL METHODS

The Microbiome of Pinus muricata Ectomycorrhizae: Community Assemblages, Fungal Species Effects, and Burkholderia as Important Bacteria in Multipartnered Symbioses

(2015) Nhu H. Nguyen et al.   MICROBIAL ECOLOGY

The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes

(2015) Pablo R. Hardoim et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Seasonal Community Succession of the Phyllosphere Microbiome

(2015) Julia K. Copeland et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Functional overlap of the Arabidopsis leaf and root microbiota

(2015) Yang Bai et al.   NATURE

Disentangling the factors shaping microbiota composition across the plant holobiont

(2015) Stéphane Hacquard   NEW PHYTOLOGIST

Common foliar fungi ofPopulus trichocarpamodifyMelampsorarust disease severity

(2015) Posy E. Busby et al.   NEW PHYTOLOGIST

A novel intracellular nitrogen-fixing symbiosis made byUstilago maydisandBacillusspp.

(2015) José Ruiz-Herrera et al.   NEW PHYTOLOGIST

The importance of the microbiome of the plant holobiont

(2015) Philippe Vandenkoornhuyse et al.   NEW PHYTOLOGIST

Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species

(2015) Devin Coleman-Derr et al.   NEW PHYTOLOGIST

Rhizobacterial volatiles and photosynthesis-related signals coordinateMYB72expression in Arabidopsis roots during onset of induced systemic resistance and iron-deficiency responses

(2015) Christos Zamioudis et al.   PLANT JOURNAL

Structure, variation, and assembly of the root-associated microbiomes of rice

(2015) Joseph Edwards et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbes are trophic analogs of animals

(2015) Shawn A. Steffan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Native root-associated bacteria rescue a plant from a sudden-wilt disease that emerged during continuous cropping

(2015) Rakesh Santhanam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolic dependencies drive species co-occurrence in diverse microbial communities

(2015) Aleksej Zelezniak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa

(2015) S. L. Lebeis et al.   SCIENCE

Plant pathogenic anaerobic bacteria use aromatic polyketides to access aerobic territory

(2015) G. Shabuer et al.   SCIENCE

Soil conditions and land use intensification effects on soil microbial communities across a range of European field sites

(2015) Bruce C. Thomson et al.   SOIL BIOLOGY & BIOCHEMISTRY

Baiting of rhizosphere bacteria with hyphae of common soil fungi reveals a diverse group of potentially mycophagous secondary consumers

(2015) M.B. Rudnick et al.   SOIL BIOLOGY & BIOCHEMISTRY

Oxalic acid: a signal molecule for fungus-feeding bacteria of the genusCollimonas?

(2015) M. B. Rudnick et al.   Environmental Microbiology Reports

The Soil Microbiome Influences Grapevine-Associated Microbiota

(2015) Iratxe Zarraonaindia et al.   mBio

Deterministic processes vary during community assembly for ecologically dissimilar taxa

(2015) Jeff R. Powell et al.   Nature Communications

Trophic network architecture of root-associated bacterial communities determines pathogen invasion and plant health

(2015) Zhong Wei et al.   Nature Communications

Interaction of Piriformospora indica with Azotobacter chroococcum

(2015) Soubhagya Kumar Bhuyan et al.   Scientific Reports

Manipulating the banana rhizosphere microbiome for biological control of Panama disease

(2015) Chao Xue et al.   Scientific Reports

The Hologenome Concept: Helpful or Hollow?

(2015) Nancy A. Moran et al.   PLOS BIOLOGY

Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes

(2015) Seth R. Bordenstein et al.   PLOS BIOLOGY

Diversity and functions of volatile organic compounds produced by Streptomyces from a disease-suppressive soil

(2015) Viviane Cordovez et al.   Frontiers in Microbiology

Bacteria in a wood fungal disease: characterization of bacterial communities in wood tissues of esca-foliar symptomatic and asymptomatic grapevines

(2015) Emilie Bruez et al.   Frontiers in Microbiology

Plant genotype-specific archaeal and bacterial endophytes but similar Bacillus antagonists colonize Mediterranean olive trees

(2015) Henry Müller et al.   Frontiers in Microbiology

Microbial communication leading to the activation of silent fungal secondary metabolite gene clusters

(2015) Tina Netzker et al.   Frontiers in Microbiology

Associations with rhizosphere bacteria can confer an adaptive advantage to plants

(2015) Cara H. Haney et al.   Nature Plants

A Higher Level Classification of All Living Organisms

(2015) Michael A. Ruggiero et al.   PLoS One

Emergence Shapes the Structure of the Seed Microbiota

(2014) Matthieu Barret et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Agrobacterium tumefaciens Deploys a Superfamily of Type VI Secretion DNase Effectors as Weapons for Interbacterial Competition In Planta

(2014) Lay-Sun Ma et al.   Cell Host & Microbe

Microbe–microbe interactions determine oomycete and fungal host colonization

(2014) Eric Kemen   CURRENT OPINION IN PLANT BIOLOGY

Improved plant resistance to drought is promoted by the root-associated microbiome as a water stress-dependent trait

(2014) Eleonora Rolli et al.   ENVIRONMENTAL MICROBIOLOGY

Spatial structuring of bacterial communities within individualGinkgo bilobatrees

(2014) Jonathan W. Leff et al.   ENVIRONMENTAL MICROBIOLOGY

Evolution of bacterial communities in the wheat crop rhizosphere

(2014) Suzanne Donn et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial networks and co-occurrence relationships in the lettuce root microbiota

(2014) Massimiliano Cardinale et al.   ENVIRONMENTAL MICROBIOLOGY

Root microbiome relates to plant host evolution in maize and other Poaceae

(2014) Marie-Lara Bouffaud et al.   ENVIRONMENTAL MICROBIOLOGY

The mycosphere constitutes an arena for horizontal gene transfer with strong evolutionary implications for bacterial-fungal interactions

(2014) MiaoZhi Zhang et al.   FEMS MICROBIOLOGY ECOLOGY

Plant host and soil origin influence fungal and bacterial assemblages in the roots of woody plants

(2014) Gregory Bonito et al.   MOLECULAR ECOLOGY

The Top 10 oomycete pathogens in molecular plant pathology

(2014) Sophien Kamoun et al.   MOLECULAR PLANT PATHOLOGY

Simultaneous profiling of seed-associated bacteria and fungi reveals antagonistic interactions between microorganisms within a shared epiphytic microbiome onTriticumandBrassicaseeds

(2014) Matthew G. Links et al.   NEW PHYTOLOGIST

Towards a holistic understanding of the beneficial interactions across thePopulusmicrobiome

(2014) Stéphane Hacquard et al.   NEW PHYTOLOGIST

Leaf and Root-Associated Fungal Assemblages Do Not Follow Similar Elevational Diversity Patterns

(2014) Aurore Coince et al.   PLoS One

Endemism and functional convergence across the North American soil mycobiome

(2014) J. M. Talbot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Relationships between phyllosphere bacterial communities and plant functional traits in a neotropical forest

(2014) S. W. Kembel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Syntrophic exchange in synthetic microbial communities

(2014) M. T. Mee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Molecular mechanisms of antimicrobial tolerance and resistance in bacterial and fungal biofilms

(2014) Heleen Van Acker et al.   TRENDS IN MICROBIOLOGY

Bacterial seed endophytes: genera, vertical transmission and interaction with plants

(2014) Sascha Truyens et al.   Environmental Microbiology Reports

Ecological Succession and Stochastic Variation in the Assembly of Arabidopsis thaliana Phyllosphere Communities

(2014) L. Maignien et al.   mBio

Genome-wide association study of Arabidopsis thaliana leaf microbial community

(2014) Matthew W. Horton et al.   Nature Communications

Assembly of complex plant–fungus networks

(2014) Hirokazu Toju et al.   Nature Communications

Niche and host-associated functional signatures of the root surface microbiome

(2014) Maya Ofek-Lalzar et al.   Nature Communications

Metabolic Resource Allocation in Individual Microbes Determines Ecosystem Interactions and Spatial Dynamics

(2014) William R. Harcombe et al.   Cell Reports

A Synthetic Community Approach Reveals Plant Genotypes Affecting the Phyllosphere Microbiota

(2014) Natacha Bodenhausen et al.   PLoS Genetics

Active invasion of bacteria into living fungal cells

(2014) Nadine Moebius et al.   eLife

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

Pythium species from rice roots differ in virulence, host colonization and nutritional profile

(2013) Evelien Van Buyten et al.   BMC PLANT BIOLOGY

An arbuscular mycorrhizal fungus significantly modifies the soil bacterial community and nitrogen cycling during litter decomposition

(2013) Erin E. Nuccio et al.   ENVIRONMENTAL MICROBIOLOGY

Below-ground fine-scale distribution and soil versus fine root detection of fungal and soil oomycete communities in a French beech forest

(2013) Aurore Coince et al.   Fungal Ecology

The Role of Bacterial Biofilms and Surface Components in Plant-Bacterial Associations

(2013) Pablo Bogino et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Detection of a novel intracellular microbiome hosted in arbuscular mycorrhizal fungi

(2013) Alessandro Desirò et al.   ISME Journal

Phylogenetic beta diversity in bacterial assemblages across ecosystems: deterministic versus stochastic processes

(2013) Jianjun Wang et al.   ISME Journal

Rhizosphere microbiome assemblage is affected by plant development

(2013) Jacqueline M Chaparro et al.   ISME Journal

Diffuse symbioses: roles of plant-plant, plant-microbe and microbe-microbe interactions in structuring the soil microbiome

(2013) Matthew G. Bakker et al.   MOLECULAR ECOLOGY

Bacterial Communities Associated with the Leaves and the Roots of Arabidopsis thaliana

(2013) Natacha Bodenhausen et al.   PLoS One

Host Genotype Shapes the Foliar Fungal Microbiome of Balsam Poplar (Populus balsamifera)

(2013) Miklós Bálint et al.   PLoS One

A Multifactor Analysis of Fungal and Bacterial Community Structure in the Root Microbiome of Mature Populus deltoides Trees

(2013) Migun Shakya et al.   PLoS One

Sharing of Diverse Mycorrhizal and Root-Endophytic Fungi among Plant Species in an Oak-Dominated Cool–Temperate Forest

(2013) Hirokazu Toju et al.   PLoS One

Diversity and heritability of the maize rhizosphere microbiome under field conditions

(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives

(2013) K. Schlaeppi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Different bacterial communities in ectomycorrhizae and surrounding soil

(2013) Unni Vik et al.   Scientific Reports

Ecological Modeling from Time-Series Inference: Insight into Dynamics and Stability of Intestinal Microbiota

(2013) Richard R. Stein et al.   PLoS Computational Biology

Diversity and Natural Functions of Antibiotics Produced by Beneficial and Plant Pathogenic Bacteria

(2012) Jos M. Raaijmakers et al.   Annual Review of Phytopathology

Distinct Ectomycorrhizospheres Share Similar Bacterial Communities as Revealed by Pyrosequencing-Based Analysis of 16S rRNA Genes

(2012) S. Uroz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Leaf microbiota in an agroecosystem: spatiotemporal variation in bacterial community composition on field-grown lettuce

(2012) Gurdeep Rastogi et al.   ISME Journal

Pythium oligandrum: an example of opportunistic success

(2012) N. Benhamou et al.   MICROBIOLOGY-SGM

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Regulation of fungal secondary metabolism

(2012) Axel A. Brakhage   NATURE REVIEWS MICROBIOLOGY

Microbial life in the phyllosphere

(2012) Julia A. Vorholt   NATURE REVIEWS MICROBIOLOGY

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

The composition of phyllosphere fungal assemblages of European beech (Fagus sylvatica ) varies significantly along an elevation gradient

(2012) Tristan Cordier et al.   NEW PHYTOLOGIST

Ecological Populations of Bacteria Act as Socially Cohesive Units of Antibiotic Production and Resistance

(2012) O. X. Cordero et al.   SCIENCE

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

Microbial Co-occurrence Relationships in the Human Microbiome

(2012) Karoline Faust et al.   PLoS Computational Biology

Microbially Mediated Plant Functional Traits

(2011) Maren L. Friesen et al.   Annual Review of Ecology Evolution and Systematics

The Quorum-Sensing Molecule Farnesol Is a Modulator of Drug Efflux Mediated by ABC Multidrug Transporters and Synergizes with Drugs in Candida albicans

(2011) Monika Sharma et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Distinct Microbial Communities within the Endosphere and Rhizosphere of Populus deltoides Roots across Contrasting Soil Types

(2011) Neil R. Gottel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Arbuscular mycorrhizal fungal communities in plant roots are not random assemblages

(2011) John Davison et al.   FEMS MICROBIOLOGY ECOLOGY

The genome of the obligate endobacterium of an AM fungus reveals an interphylum network of nutritional interactions

(2011) Stefano Ghignone et al.   ISME Journal

454-sequencing reveals stochastic local reassembly and high disturbance tolerance within arbuscular mycorrhizal fungal communities

(2011) Ylva Lekberg et al.   JOURNAL OF ECOLOGY

Bacterial-Fungal Interactions: Hyphens between Agricultural, Clinical, Environmental, and Food Microbiologists

(2011) P. Frey-Klett et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

The Type VI Secretion System: A Multipurpose Delivery System with a Phage-Like Machinery

(2011) Angela R. Records   MOLECULAR PLANT-MICROBE INTERACTIONS

Bacteria-induced natural product formation in the fungus Aspergillus nidulans requires Saga/Ada-mediated histone acetylation

(2011) H.-W. Nutzmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

Competitive and cooperative metabolic interactions in bacterial communities

(2011) Shiri Freilich et al.   Nature Communications

Microbial Spy Games and Host Response: Roles of a Pseudomonas aeruginosa Small Molecule in Communication with Other Species

(2011) Lucja M. Jarosz et al.   PLoS Pathogens

Impact of Endofungal Bacteria on Infection Biology, Food Safety, and Drug Development

(2011) Gerald Lackner et al.   PLoS Pathogens

Predator-Prey Chemical Warfare Determines the Expression of Biocontrol Genes by Rhizosphere-Associated Pseudomonas fluorescens

(2010) A. Jousset et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Both Leaf Properties and Microbe-Microbe Interactions Influence Within-Species Variation in Bacterial Population Diversity and Structure in the Lettuce (Lactuca Species) Phyllosphere

(2010) P. J. Hunter et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diverse Bacteria Inhabit Living Hyphae of Phylogenetically Diverse Fungal Endophytes

(2010) M. T. Hoffman et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Evidence of dispersal limitation in soil microorganisms: Isolation reduces species richness on mycorrhizal tree islands

(2010) Kabir G. Peay et al.   ECOLOGY

The ecology of the phyllosphere: geographic and phylogenetic variability in the distribution of bacteria on tree leaves

(2010) Amanda J. Redford et al.   ENVIRONMENTAL MICROBIOLOGY

Characterisation of microbial communities colonising the hyphal surfaces of arbuscular mycorrhizal fungi

(2010) Tanja R Scheublin et al.   ISME Journal

The obligate endobacteria of arbuscular mycorrhizal fungi are ancient heritable components related to the Mollicutes

(2010) Maria Naumann et al.   ISME Journal

Endofungal bacterium controls its host by an hrp type III secretion system

(2010) Gerald Lackner et al.   ISME Journal

Detection of Betaproteobacteria inside the Mycelium of the Fungus Mortierella elongata

(2010) Yoshinori Sato et al.   MICROBES AND ENVIRONMENTS

Emergent cooperation in microbial metabolism

(2010) Edwin H Wintermute et al.   Molecular Systems Biology

Pseudomonas fluorescens BBc6R8 type III secretion mutants no longer promote ectomycorrhizal symbiosis

(2010) Angela M. Cusano et al.   Environmental Microbiology Reports

Role of fungal trehalose and bacterial thiamine in the improved survival and growth of the ectomycorrhizal fungus Laccaria bicolor S238N and the helper bacterium Pseudomonas fluorescens BBc6R8

(2010) A. Deveau et al.   Environmental Microbiology Reports

Plants, Mycorrhizal Fungi, and Bacteria: A Network of Interactions

(2009) Paola Bonfante et al.   Annual Review of Microbiology

Bacterial/Fungal Interactions: From Pathogens to Mutualistic Endosymbionts

(2009) Donald Y. Kobayashi et al.   Annual Review of Phytopathology

Migratory Response of Soil Bacteria to Lyophyllum sp. Strain Karsten in Soil Microcosms

(2009) J. A. Warmink et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Contrasting Soil pH Effects on Fungal and Bacterial Growth Suggest Functional Redundancy in Carbon Mineralization

(2009) J. Rousk et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Antagonistic interactions among coral-associated bacteria

(2009) Krystal L. Rypien et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial Succession on the Leaf Surface: A Novel System for Studying Successional Dynamics

(2009) Amanda J. Redford et al.   MICROBIAL ECOLOGY

Fungi evolved right on track

(2009) Robert Lücking et al.   MYCOLOGIA

Priming of plant innate immunity by rhizobacteria and β-aminobutyric acid: differences and similarities in regulation

(2009) Sjoerd Van der Ent et al.   NEW PHYTOLOGIST

Massively parallel 454 sequencing indicates hyperdiverse fungal communities in temperateQuercus macrocarpaphyllosphere

(2009) A. Jumpponen et al.   NEW PHYTOLOGIST

The rhizosphere zoo: An overview of plant-associated communities of microorganisms, including phages, bacteria, archaea, and fungi, and of some of their structuring factors

(2009) M. Buée et al.   PLANT AND SOIL

Intimate bacterial-fungal interaction triggers biosynthesis of archetypal polyketides in Aspergillus nidulans

(2009) V. Schroeckh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rules of Engagement: Interspecies Interactions that Regulate Microbial Communities

(2008) Ainslie E.F. Little et al.   Annual Review of Microbiology

Detection and identification of bacteria intimately associated with fungi of the orderSebacinales

(2008) Monica Sharma et al.   CELLULAR MICROBIOLOGY

Universal and species-specific bacterial ‘fungiphiles’ in the mycospheres of different basidiomycetous fungi

(2008) J. A. Warmink et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial effects on arbuscular mycorrhizal fungi and mycorrhiza development as influenced by the bacteria, fungi, and host plant

(2008) Barbara Pivato et al.   MYCORRHIZA

Bacterial mycophagy: definition and diagnosis of a unique bacterial–fungal interaction

(2008) Johan H. J. Leveau et al.   NEW PHYTOLOGIST