Distinct Microbial Communities within the Endosphere and Rhizosphere of Populus deltoides Roots across Contrasting Soil Types

Mercury and Other Heavy Metals Influence Bacterial Community Structure in Contaminated Tennessee Streams

(2010) Tatiana A. Vishnivetskaya et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bacterial Communities in the Rhizosphere of Biofuel Crops Grown on Marginal Lands as Evaluated by 16S rRNA Gene Pyrosequences

(2010) Ederson da C. Jesus et al.   BioEnergy Research

Poplar as a feedstock for biofuels: A review of compositional characteristics

(2010) Poulomi Sannigrahi et al.   Biofuels Bioproducts & Biorefining-Biofpr

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

(2010) Susan M. Huse et al.   ENVIRONMENTAL MICROBIOLOGY

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

Massively parallel 454-sequencing of fungal communities inQuercusspp. ectomycorrhizas indicates seasonal dynamics in urban and rural sites

(2010) ARI JUMPPONEN et al.   MOLECULAR ECOLOGY

Soil Microbial Community Responses to Multiple Experimental Climate Change Drivers

(2009) H. F. Castro et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Impact of an 8-Year-Old Transgenic Poplar Plantation on the Ectomycorrhizal Fungal Community

(2009) F. O. P. Stefani et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Poplar and its Bacterial Endophytes: Coexistence and Harmony

(2009) Daniel van der Lelie et al.   CRITICAL REVIEWS IN PLANT SCIENCES

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

(2009) Victor Kunin et al.   ENVIRONMENTAL MICROBIOLOGY

Diversity of endophytic bacterial communities in poplar grown under field conditions

(2009) Kristina Ulrich et al.   FEMS MICROBIOLOGY ECOLOGY

Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

(2009) Micah Hamady et al.   ISME Journal

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

(2009) M. Buée et al.   NEW PHYTOLOGIST

Rhizosphere: biophysics, biogeochemistry and ecological relevance

(2009) Philippe Hinsinger et al.   PLANT AND SOIL

Genome Survey and Characterization of Endophytic Bacteria Exhibiting a Beneficial Effect on Growth and Development of Poplar Trees

(2008) S. Taghavi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Members of the phylumAcidobacteriaare dominant and metabolically active in rhizosphere soil

(2008) Sang-Hoon Lee et al.   FEMS MICROBIOLOGY LETTERS

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH

Bacterial communities in soybean rhizosphere in response to soil type, soybean genotype, and their growth stage

(2008) Yanxia Xu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Properties of bacterial endophytes and their proposed role in plant growth

(2008) Pablo R. Hardoim et al.   TRENDS IN MICROBIOLOGY

Widespread occurrence and phylogenetic placement of a soil clone group adds a prominent new branch to the fungal tree of life

(2007) T.M. Porter et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION